Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00815 and RBAM_005110

See DNA alignment / Visit BSNT_00815 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence pep-align/BSNT_00815___ydcK.1.9828.seq
#    -bsequence pep-align/RBAM_005110___ydcK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00815___ydcK-RBAM_005110___ydcK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00815___ydcK-RBAM_005110___ydcK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00815___ydcK
# 2: RBAM_005110___ydcK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     124/150 (82.7%)
# Similarity:   133/150 (88.7%)
# Gaps:           1/150 ( 0.7%)
# Score: 683.0
# 
#
#=======================================

BSNT_00815___      1 MDNIELQKLTEDISKTYFKKPFRHQALFNDRLKTTGGRYLLTSHNIELNR     50
                     |||.:|||||||||...|.|||||:|.||||||||||||:|:||||||||
RBAM_005110__      1 MDNEQLQKLTEDISLQDFGKPFRHRAFFNDRLKTTGGRYMLSSHNIELNR     50

BSNT_00815___     51 KYLIEHGREELIGIIKHELCHYHLHLEGKGYKHRDRDFRMLLQQVNAPRF    100
                     ||||||||.||:|||||||||||||||||||||||:|||.|||:|.||||
RBAM_005110__     51 KYLIEHGRSELVGIIKHELCHYHLHLEGKGYKHRDKDFRDLLQKVGAPRF    100

BSNT_00815___    101 CTPLKKKAENKKTYMYICTACGQQYIKKRAMNPDRYRCGKCRGKIKRIFS    150
                     ||||:.|...||||||.|.||||||||||||||:||.|||||||||||| 
RBAM_005110__    101 CTPLQTKKTQKKTYMYRCAACGQQYIKKRAMNPERYACGKCRGKIKRIF-    149


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