Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00382 and RBAM_005530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence pep-align/BSNT_00382.1.9828.seq
# -bsequence pep-align/RBAM_005530___ybfB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00382-RBAM_005530___ybfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00382-RBAM_005530___ybfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00382
# 2: RBAM_005530___ybfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 188/430 (43.7%)
# Similarity: 224/430 (52.1%)
# Gaps: 148/430 (34.4%)
# Score: 985.0
#
#
#=======================================
BSNT_00382 1 MK-RLHYAWIIVSVTFLILLAVQGVRLSFGAFVEPWERQFSIDRSTISLI 49
|: :.|||||||.|||...|||||.||||||||||||:.||::|.|||||
RBAM_005530__ 1 MRIKYHYAWIIVFVTFFTFLAVQGARLSFGAFVEPWEKDFSMNRGTISLI 50
BSNT_00382 50 STVSFIVYGISQPVIGRLVDKWGARAVLAWSALLTGVSIFLTYLVTSPWQ 99
||:|||:||||||:|||||||.|.|.:|:.|..:.|:|..||..|..|||
RBAM_005530__ 51 STLSFIIYGISQPIIGRLVDKLGPRMILSVSTFVVGISFILTSFVNHPWQ 100
BSNT_00382 100 LFLLYGLGVSLGVGGASNVAASVLVVNWFSKKRGLAFGTMEAGFGAGQML 149
||:|||:.:|:||||||||||:|:|.|||::|||||||.|||||||||||
RBAM_005530__ 101 LFILYGIVISVGVGGASNVAATVVVTNWFNEKRGLAFGIMEAGFGAGQML 150
BSNT_00382 150 LVPGSLMLIHWFSWKLTVVVLGLLLILIVFPAALLMLRNNPSEKNTEPIG 199
||||||:||.||:||||||:|||:|::||||..||.|||:|.|....|:|
RBAM_005530__ 151 LVPGSLILIQWFNWKLTVVILGLILMVIVFPVILLFLRNHPGEMGLSPMG 200
BSNT_00382 200 GLAASEKETAPKTTALSVAGMFRMRQFWFLIFPFLICGFTTVGLMDTHLI 249
|...:|.|:...|...||..:|..:||||||.||.||||||.||||||||
RBAM_005530__ 201 GFMKAEAESEQHTAHFSVWTVFCKKQFWFLILPFAICGFTTTGLMDTHLI 250
BSNT_00382 250 PFSHDHGFSTTVTSAAVSLLAGLILLASCCPEL----------------- 282
||||||||||:|||||||:|||..:|......:
RBAM_005530__ 251 PFSHDHGFSTSVTSAAVSVLAGFNILGIIISGIAADRWSSKKMLILLYVI 300
BSNT_00382 282 -------------------------------------------------- 282
RBAM_005530__ 301 RALSICILLYSHHPVILLIFATLFGLVDFATVAPTQMLATQYFKQYSVGF 350
BSNT_00382 282 -------------------------------------------------- 282
RBAM_005530__ 351 ILGWLFLSHQIGSALGAYVPGFLYSEMGNYDLSFYFSIIILLGAAIFTFL 400
BSNT_00382 282 ------------------------------ 282
RBAM_005530__ 401 LPETVKIKKEQKPKTDSASNETVSKRVNTP 430
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