Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03912 and RBAM_005880

See DNA alignment / Visit BSNT_03912 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_03912___yraE.1.9828.seq
#    -bsequence pep-align/RBAM_005880___yraE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03912___yraE-RBAM_005880___yraE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03912___yraE-RBAM_005880___yraE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03912___yraE
# 2: RBAM_005880___yraE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 65
# Identity:      53/65 (81.5%)
# Similarity:    61/65 (93.8%)
# Gaps:           0/65 ( 0.0%)
# Score: 268.0
# 
#
#=======================================

BSNT_03912___      1 MEYALHEVLEVQEMTAFKTLCLTKSKTMKALVSDPKLKEIMQQDVDITTR     50
                     |..||||:||:|||.:||:||||||||||||||||:||||||||||.:||
RBAM_005880__      1 MARALHELLEIQEMASFKSLCLTKSKTMKALVSDPQLKEIMQQDVDTSTR     50

BSNT_03912___     51 QLQEFASILSNAKHE     65
                     ||||||||||:|:||
RBAM_005880__     51 QLQEFASILSDAQHE     65


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