Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00969 and RBAM_005960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence pep-align/BSNT_00969___expZ.1.9828.seq
# -bsequence pep-align/RBAM_005960___expZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00969___expZ-RBAM_005960___expZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00969___expZ-RBAM_005960___expZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00969___expZ
# 2: RBAM_005960___expZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity: 383/549 (69.8%)
# Similarity: 455/549 (82.9%)
# Gaps: 8/549 ( 1.5%)
# Score: 1988.0
#
#
#=======================================
BSNT_00969___ 1 MKEIVTLTNVSYEVKDQTVFKHVNASVQQGDIIGITGKNGAGKSTLLHLI 50
|||::.::.:|||:....:|:.::||||||||||:.||||||||.||.||
RBAM_005960__ 1 MKEMLKISGISYEINSVPLFEQISASVQQGDIIGVIGKNGAGKSLLLQLI 50
BSNT_00969___ 51 HTDLAPSQGQI-LRKDIKLALVEQETAAYSFADQTPAEKKLLEKWHVPLR 99
....||||||| :.:|:.:.:|||||.||......|||..|||||:||.|
RBAM_005960__ 51 CNQKAPSQGQIQMMQDVNIYMVEQETEAYDSGHPEPAEAALLEKWNVPAR 100
BSNT_00969___ 100 DFHQLSGGEKLKARLAKGLSEDADLLLLDEPTNHLDEKSLQFLIQHLKHY 149
.|.|||||||||||||||.|..:.||||||||||||:.||:.|:..:|:|
RBAM_005960__ 101 AFSQLSGGEKLKARLAKGFSSSSSLLLLDEPTNHLDQHSLEILLNQIKNY 150
BSNT_00969___ 150 SGTVILVSHDRYFLDEAATKIWSLEDQTLIEFKGNYSGYMKFREKKRLTQ 199
.||:|.|||||.|:|.||||||::|.:.|||.|||||.||:.|:::||||
RBAM_005960__ 151 KGTIIFVSHDRAFIDAAATKIWAIEGKKLIEHKGNYSSYMEVRKQRRLTQ 200
BSNT_00969___ 200 QREYEKQQKMVERIEAQMNGLASWSEKAHAQSTKKEGFKEYHRVKAKRTD 249
|||||.||.||:|||||||.|::||:||||||||.|||||||||||||||
RBAM_005960__ 201 QREYENQQNMVKRIEAQMNELSAWSKKAHAQSTKIEGFKEYHRVKAKRTD 250
BSNT_00969___ 250 AQIKSKQKRLEKELEKAKAEPVTPEYTVRFSIDTTHKTGKRFLEVQNVTK 299
||||||||||||||||||||||..||.|||||:...|.|||||||::|||
RBAM_005960__ 251 AQIKSKQKRLEKELEKAKAEPVEAEYEVRFSIEHRKKAGKRFLEVRDVTK 300
BSNT_00969___ 300 AFGERTLFKNANFTIQHGEKVAIIGPNGSGKTTLLNIILGQETAEGSVWV 349
::..||||||.|||:.||||:||.|||||||||||.:|||||.|:||:|:
RBAM_005960__ 301 SYDGRTLFKNVNFTVMHGEKIAITGPNGSGKTTLLKVILGQEKAQGSIWI 350
BSNT_00969___ 350 SPSANIGYLTQEVFDLPLEQTPEELFENETFKARGHVQNLMRHLGFTAAQ 399
|||||:||||||||||||::|||:||..|||:.||:||:||:||||||||
RBAM_005960__ 351 SPSANVGYLTQEVFDLPLDKTPEQLFYKETFEERGNVQSLMKHLGFTAAQ 400
BSNT_00969___ 400 WTEPIKHMSMGERVKIKLMAYILEEKDVLILDEPTNHLDLPSREQLEETL 449
|||||..||||||||.||||:||||||||||||||||||||||||||:||
RBAM_005960__ 401 WTEPIGKMSMGERVKCKLMAFILEEKDVLILDEPTNHLDLPSREQLEDTL 450
BSNT_00969___ 450 SQYSGTLLAVSHDRYFLEKTTNSKLVISNNGIKKQLNDAAPSERNEREEL 499
::|.|||:.|||||||:||||:.:|.|||..::||..: :||.|::.|||
RBAM_005960__ 451 ARYDGTLIIVSHDRYFVEKTTDIRLDISNGSVRKQWKE-SPSVRDDAEEL 499
BSNT_00969___ 500 RLKLETERQEVLGKLSFMTPNDKGYKELDQAFNELTKRIKELDHQDKND 548
||||||||||||||||||||.||.|:||||.|.|||:.||:|.
RBAM_005960__ 500 RLKLETERQEVLGKLSFMTPADKQYRELDQKFKELTEEIKKLK------ 542
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