Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00982 and RBAM_006030

See DNA alignment / Visit BSNT_00982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_00982___ydhB.1.9828.seq
#    -bsequence pep-align/RBAM_006030___ydhB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00982___ydhB-RBAM_006030___ydhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00982___ydhB-RBAM_006030___ydhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00982___ydhB
# 2: RBAM_006030___ydhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     209/252 (82.9%)
# Similarity:   233/252 (92.5%)
# Gaps:           7/252 ( 2.8%)
# Score: 1056.5
# 
#
#=======================================

BSNT_00982___      1 -----MLIILVMFLLGIILGFIGAGGAGFVIALLTLLFHIPIHTALGTSL     45
                          :|||||||||||||||||||||||||||||:|||:||||||||||
RBAM_006030__      1 MEEKIVLIILVMFLLGIILGFIGAGGAGFVIALLTILFHVPIHTALGTSL     50

BSNT_00982___     46 AGMAFTSLSGAYSHYREGNIQMKIGLIVGGFAAVGSFFGAKLTSFIPADL     95
                     |||||||||||:|||||||||||||||||.|||.||||||:|||.|||||
RBAM_006030__     51 AGMAFTSLSGAFSHYREGNIQMKIGLIVGVFAAFGSFFGARLTSLIPADL    100

BSNT_00982___     96 LHYLTAGMLFLSAILILIRLFILKEKAQVN--QSTLSTYTRAVILGIAAG    143
                     |||||||||||||:|||:||||:||..:.:  ||.|:.:.:||:||:.||
RBAM_006030__    101 LHYLTAGMLFLSALLILVRLFIVKETQEDSGQQSNLNIWVKAVVLGVIAG    150

BSNT_00982___    144 VLSGTFGIGSAPFIQIGLMIMLNLSIRHSVGTTMLVIIPLAVGGGIGYIT    193
                     :|||||||||||||||||||:|.||||.|||||||||||||||||:||:|
RBAM_006030__    151 ILSGTFGIGSAPFIQIGLMILLRLSIRQSVGTTMLVIIPLAVGGGLGYVT    200

BSNT_00982___    194 EGFVDYVLLVKVLVGTMCGAYVGAKFTNLMPKVVLKSAIFLTPAIAGLLL    243
                     ||||||:||||||:|||||||||||||||:|||:||||||||||||||:|
RBAM_006030__    201 EGFVDYMLLVKVLIGTMCGAYVGAKFTNLVPKVILKSAIFLTPAIAGLML    250

BSNT_00982___    244 LF    245
                     ||
RBAM_006030__    251 LF    252


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