Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01055 and RBAM_006540

See DNA alignment / Visit BSNT_01055 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_01055___gutB.1.9828.seq
#    -bsequence pep-align/RBAM_006540___gutB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01055___gutB-RBAM_006540___gutB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01055___gutB-RBAM_006540___gutB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01055___gutB
# 2: RBAM_006540___gutB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity:     336/377 (89.1%)
# Similarity:   347/377 (92.0%)
# Gaps:          24/377 ( 6.4%)
# Score: 1758.0
# 
#
#=======================================

BSNT_01055___      1 MGAVTEKTKMYALTFYFLKKGTCQMTHTVPQNMKAAVMHNTREIKIETLP     50
                                             ||||||||||||||||||||||||||
RBAM_006540__      1 ------------------------MTHTVPQNMKAAVMHNTREIKIETLP     26

BSNT_01055___     51 VPDINHDEVLIKVMAVGICGSDLHYYTNGRIGNYVVEKPFILGHECAGEI    100
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006540__     27 VPEINHDEVLIKVMAVGICGSDLHYYTNGRIGNYVVEKPFILGHECAGEI     76

BSNT_01055___    101 AAVGSAVDQFKVGDRVAVEPGVTCGRCEACKEGRYNLCPDVQFLATPPVD    150
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_006540__     77 AAVGSSVDQFKVGDRVAVEPGVTCGRCEACKEGRYNLCPDVQFLATPPVD    126

BSNT_01055___    151 GAFVQYIKMRQDFVFLIPDSLSYEDAALIEPFSVGIHAAARTKLQPGSTI    200
                     |||||||||||||||.|||||||||||||||||||||||:|||||||||:
RBAM_006540__    127 GAFVQYIKMRQDFVFSIPDSLSYEDAALIEPFSVGIHAASRTKLQPGSTV    176

BSNT_01055___    201 AIMGMGPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAAKKMGATHIINIRE    250
                     ||||||||||||||||||:|||||||||||||||:|||||||||:||:||
RBAM_006540__    177 AIMGMGPVGLMAVAAAKAYGAGTIIVTDLEPLRLDAAKKMGATHVINVRE    226

BSNT_01055___    251 QDALEEIKTITNDRGVDVAWETAGNPAALQSALASVRRGGKLAIVGLPSQ    300
                     |||.||||||||.||||.||||||||||||||||||||||||||||||||
RBAM_006540__    227 QDAGEEIKTITNGRGVDAAWETAGNPAALQSALASVRRGGKLAIVGLPSQ    276

BSNT_01055___    301 NEIPLNVPFIADNEIDIYGIFRYANTYPKGIEFLASGIVDTKHLVTDQYS    350
                     ||||||||||||||||||||||||||||:||||||||||||||||||||.
RBAM_006540__    277 NEIPLNVPFIADNEIDIYGIFRYANTYPRGIEFLASGIVDTKHLVTDQYP    326

BSNT_01055___    351 LEQTQEAMERALQFKNECLKVMVYPNR    377
                     ||:||||||||.|:|||||||||||||
RBAM_006540__    327 LEKTQEAMERAFQYKNECLKVMVYPNR    353


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