Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01056 and RBAM_006550

See DNA alignment / Visit BSNT_01056 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:44
# Commandline: needle
#    -asequence pep-align/BSNT_01056___gutP.1.9828.seq
#    -bsequence pep-align/RBAM_006550___gutA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01056___gutP-RBAM_006550___gutA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01056___gutP-RBAM_006550___gutA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01056___gutP
# 2: RBAM_006550___gutA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 463
# Identity:     414/463 (89.4%)
# Similarity:   442/463 (95.5%)
# Gaps:           5/463 ( 1.1%)
# Score: 2140.0
# 
#
#=======================================

BSNT_01056___      1 MIETEKVTAMKVKHQSKSSTGLSWFERIGYGFGDMSYNIIFQFVNAYLLF     50
                     ||||||..|:|.|::     ||||.||:||||||||||||||||||||||
RBAM_006550__      1 MIETEKAAAVKTKYR-----GLSWMERVGYGFGDMSYNIIFQFVNAYLLF     45

BSNT_01056___     51 YYTDVGGIQPAVIATLFLVVRVLDAIFDPIMGLILDKTNTRWGKARPYLL    100
                     ||||||||:|||||.|||:|||||||||||||:|||||||||||||||||
RBAM_006550__     46 YYTDVGGIKPAVIAALFLIVRVLDAIFDPIMGVILDKTNTRWGKARPYLL     95

BSNT_01056___    101 WVAFPFALFTFLCFTTPHFGETGNMVYAYVTYILLGMSFSMQTIPVNSLT    150
                     |||||||||||||||||||||||||||||:||||||||||||||||||||
RBAM_006550__     96 WVAFPFALFTFLCFTTPHFGETGNMVYAYITYILLGMSFSMQTIPVNSLT    145

BSNT_01056___    151 GRMTNSVEERTVLTTTRMILVYIGILLSISCATPLATAIGGENQAFGFQM    200
                     ||||||||||||||||||||||||||||||||||||.||||::|||||||
RBAM_006550__    146 GRMTNSVEERTVLTTTRMILVYIGILLSISCATPLADAIGGKDQAFGFQM    195

BSNT_01056___    201 TALIYAAVSIVLNLFSFFTVRERIQPKKRKKQGIKKTLSVLFQNKPLLML    250
                     ||||||||||.|||||||||||||||:||||||:||||||||:|||||:|
RBAM_006550__    196 TALIYAAVSIALNLFSFFTVRERIQPEKRKKQGMKKTLSVLFRNKPLLIL    245

BSNT_01056___    251 ISSFLAFAIGFNIKLSTMVYYFTYNVNHKEFVFMGTVLFFGAALISNLFI    300
                     :|:|||||||||||||||||||||||:||||||:||||||||||||||||
RBAM_006550__    246 VSAFLAFAIGFNIKLSTMVYYFTYNVSHKEFVFLGTVLFFGAALISNLFI    295

BSNT_01056___    301 PFFSEKWGRKQVMIITAALSLISYAGLHFTPYSSITLIFIWLFVSGFFTT    350
                     ||||||.||||||||||||||||||||.||.|||:.|||.||||||||||
RBAM_006550__    296 PFFSEKRGRKQVMIITAALSLISYAGLQFTSYSSLPLIFFWLFVSGFFTT    345

BSNT_01056___    351 PLNTLAWGMVADCVDYAEWKTGVRADGVVISSMSFINKLGVALAGSFSAI    400
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_006550__    346 PLNTLAWGMVADCVDYAEWKTGVRADGVVISSMSFINKLGVALAGSFSAV    395

BSNT_01056___    401 YLGIAGYVANTDQTVASLNAIKNMNALIPGFFILLSIILIAFYPLTEKRY    450
                     |||||||.||||||.:||||||||||||||.|||||||||:|||||||:|
RBAM_006550__    396 YLGIAGYAANTDQTTSSLNAIKNMNALIPGLFILLSIILISFYPLTEKKY    445

BSNT_01056___    451 KHIISELEQRSAR    463
                     :.::|:||||:||
RBAM_006550__    446 QQMMSDLEQRAAR    458


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