Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01171 and RBAM_007240

See DNA alignment / Visit BSNT_01171 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence pep-align/BSNT_01171___cotJA.1.9828.seq
#    -bsequence pep-align/RBAM_007240___cotJA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01171___cotJA-RBAM_007240___cotJA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01171___cotJA-RBAM_007240___cotJA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01171___cotJA
# 2: RBAM_007240___cotJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      66/82 (80.5%)
# Similarity:    75/82 (91.5%)
# Gaps:           0/82 ( 0.0%)
# Score: 390.0
# 
#
#=======================================

BSNT_01171___      1 MKDMQPFSPVKSYTPFHSRFDPCPPIGKKYYRTPPNLYMTFQPEHMEQFS     50
                     ||:.|||:|||||.|||||||||||||:||:||||:|||.|||.|:||||
RBAM_007240__      1 MKENQPFTPVKSYKPFHSRFDPCPPIGRKYFRTPPHLYMRFQPYHLEQFS     50

BSNT_01171___     51 PMEALRKGTLWKDLYDFYENPYRGGDAHGKKG     82
                     ||||||||||||||||||:||||||..:|:|.
RBAM_007240__     51 PMEALRKGTLWKDLYDFYDNPYRGGIEYGEKD     82


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