Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01256 and RBAM_007630

See DNA alignment / Visit BSNT_01256 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_01256___yfmR.1.9828.seq
#    -bsequence pep-align/RBAM_007630___yfmR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01256___yfmR-RBAM_007630___yfmR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01256___yfmR-RBAM_007630___yfmR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01256___yfmR
# 2: RBAM_007630___yfmR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 629
# Identity:     550/629 (87.4%)
# Similarity:   591/629 (94.0%)
# Gaps:           0/629 ( 0.0%)
# Score: 2840.0
# 
#
#=======================================

BSNT_01256___      1 MSILKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIA     50
                     |||:|||||||||||||||||||||||||||||||||||||||||||.||
RBAM_007630__      1 MSIIKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKTIA     50

BSNT_01256___     51 GLESIEEGEITKSGSVQVEFLHQDPELPAGQTVLEHIYSGESAVMKTLRE    100
                     ||||.||||||.||:|.:|||||||:||||||||||||||.||||:|:||
RBAM_007630__     51 GLESTEEGEITASGNVHIEFLHQDPDLPAGQTVLEHIYSGGSAVMRTMRE    100

BSNT_01256___    101 YEKALYELGKDPENEQRQKHLLAAQAKMDANNAWDANTLAKTVLSKLGVN    150
                     |||||..|.::|||:||||.||.|||:||||:||:|||||||||:||||.
RBAM_007630__    101 YEKALQALNEEPENDQRQKQLLDAQARMDANDAWEANTLAKTVLTKLGVT    150

BSNT_01256___    151 DVTKPVNELSGGQKKRVAIAKNLIQPADLLILDEPTNHLDNETIEWLEGY    200
                     |:.|.|:||||||:||||||||:|||||||||||||||||||||||||||
RBAM_007630__    151 DLMKDVSELSGGQRKRVAIAKNVIQPADLLILDEPTNHLDNETIEWLEGY    200

BSNT_01256___    201 LSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAER    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007630__    201 LSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAER    250

BSNT_01256___    251 EAQAEQKETKRQNLLRRELAWLRRGAKARSTKQKARIDRVETLKEQKGPQ    300
                     ||.|||||||||||||||||||||||||||||||||:||.|.|||||||.
RBAM_007630__    251 EALAEQKETKRQNLLRRELAWLRRGAKARSTKQKARVDRAEALKEQKGPA    300

BSNT_01256___    301 SSGSLDFAIGSHRLGKQVIEAENVMIAYDGRMLVDRFNELVIPGERIGII    350
                     .||||||||||||||||||||:||.|.|:|:.|:.:||||||||||||||
RBAM_007630__    301 VSGSLDFAIGSHRLGKQVIEADNVAITYNGQALISQFNELVIPGERIGII    350

BSNT_01256___    351 GPNGIGKTTLLNALAGRHTPDGGDITIGQTVRIGYYTQDHSEMNGELKVI    400
                     ||||||||||||:||||..||.|:|||||||||||||||||||||::|||
RBAM_007630__    351 GPNGIGKTTLLNSLAGRIQPDSGNITIGQTVRIGYYTQDHSEMNGDMKVI    400

BSNT_01256___    401 DYIKETAEVVKTADGDMITAEQMLERFLFPRSMQQTYIRKLSGGEKRRLY    450
                     :|||||||:||||:||:||||||||||||||.||||||||||||||||||
RBAM_007630__    401 EYIKETAEIVKTAEGDVITAEQMLERFLFPRPMQQTYIRKLSGGEKRRLY    450

BSNT_01256___    451 LLQVLMQEPNVLFLDEPTNDLDTETLSVLEDYIDQFPGVVITVSHDRYFL    500
                     ||.||||||||||||||||||||||||||||||:||||||||||||||||
RBAM_007630__    451 LLNVLMQEPNVLFLDEPTNDLDTETLSVLEDYIEQFPGVVITVSHDRYFL    500

BSNT_01256___    501 DRVVDRLIVFEGNGVISRFQGSYSDYMEESKAKKAAQKPTAEEKTAEAEP    550
                     |||:||||||||.|||||||||||:|||.:||||.|.|..||||..|.||
RBAM_007630__    501 DRVIDRLIVFEGQGVISRFQGSYSEYMEHAKAKKTAVKQPAEEKKTEEEP    550

BSNT_01256___    551 KKKRKKLSYKDQLEWDGIEDKIAQLEEKHEQLEADIAAAGSDFGKIQELM    600
                     ||||||||||||:||||||||||.|||||::|||:||.||||||||||||
RBAM_007630__    551 KKKRKKLSYKDQIEWDGIEDKIAGLEEKHQRLEAEIAEAGSDFGKIQELM    600

BSNT_01256___    601 AEQAKTAEELEAAMDRWTELSLMIEELES    629
                     ||||||||||||||:|||||||||||||:
RBAM_007630__    601 AEQAKTAEELEAAMERWTELSLMIEELEN    629


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