Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01622 and RBAM_009680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence pep-align/BSNT_01622___lytE.1.9828.seq
# -bsequence pep-align/RBAM_009680___lytE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01622___lytE-RBAM_009680___lytE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01622___lytE-RBAM_009680___lytE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01622___lytE
# 2: RBAM_009680___lytE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity: 216/334 (64.7%)
# Similarity: 247/334 (74.0%)
# Gaps: 60/334 (18.0%)
# Score: 1104.0
#
#
#=======================================
BSNT_01622___ 1 MKKQIITATTAVVLGSTLFAGAASAQSIKVKKGDTLWDLSRKYDTTISKI 50
||||::|||||||||:||||||||||:||||||||||.||.:|.|:|:.|
RBAM_009680__ 1 MKKQLVTATTAVVLGTTLFAGAASAQTIKVKKGDTLWGLSNRYGTSINSI 50
BSNT_01622___ 51 KSENHLRSDIIYVGQTLSINGKSTSSKSSSSSSSSSTYKVKSGDSLWKIS 100
||||.|:|||||:||||||||||:|..||||.||||||||..|||||||:
RBAM_009680__ 51 KSENKLKSDIIYIGQTLSINGKSSSGSSSSSKSSSSTYKVVKGDSLWKIA 100
BSNT_01622___ 101 KKYGMTINELKKLNGLKSDLLRVGQVLKLKGSTSSSSSSSSKVSSSSTST 150
.||.||:|:||.|||||:||:|:|||||:|||||.|:||.
RBAM_009680__ 101 NKYKMTVNQLKSLNGLKTDLIRIGQVLKVKGSTSGSTSSG---------- 140
BSNT_01622___ 151 YKVKSGDSLSKIASKYGTTVSKLKSLNGLKSDVIYVNQVLKVKGTSTSSS 200
|:||.
RBAM_009680__ 141 ---------------------------------------------SSSSK 145
BSNT_01622___ 201 KPASSSSSSSSKTSSTSLNVSKLVSDAKALVGTPYKWGGTTTSGFDCSGF 250
:| |||...:.|||||:||:|||::|.||||.||||||||||||||
RBAM_009680__ 146 QP-----SSSHNAAQTSLNVNKLISDAQSLTGTPYVWGGTTTSGFDCSGF 190
BSNT_01622___ 251 IWYVLNKQTSVGRTSTAGYWSSMKSIASPSVGDFVFFTTYKSGPSHMGIY 300
|||:|||||||||||||||||||||::|||.|||||||||::||||||:|
RBAM_009680__ 191 IWYLLNKQTSVGRTSTAGYWSSMKSVSSPSRGDFVFFTTYQAGPSHMGVY 240
BSNT_01622___ 301 IGNNSFIHAGSDGVQISSLNNSYWKPRYLGAKRF 334
||||.|||||||||..|.||||||||||||||||
RBAM_009680__ 241 IGNNKFIHAGSDGVTTSDLNNSYWKPRYLGAKRF 274
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