Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00371 and RBAM_011070

See DNA alignment / Visit BSNT_00371 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence pep-align/BSNT_00371___cypC.1.9828.seq
#    -bsequence pep-align/RBAM_011070___cypC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00371___cypC-RBAM_011070___cypC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00371___cypC-RBAM_011070___cypC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00371___cypC
# 2: RBAM_011070___cypC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity:     290/417 (69.5%)
# Similarity:   353/417 (84.7%)
# Gaps:           1/417 ( 0.2%)
# Score: 1613.0
# 
#
#=======================================

BSNT_00371___      1 MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMT     50
                     |:|||||:|.|||||.||::||:|:|||.|.|.||:|:||||||.||||:
RBAM_011070__      1 MDEQIPHEKGLDNSLALLRDGYVFVKNRAENYRSDVFRARLLGKTFICMS     50

BSNT_00371___     51 GAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFL    100
                     ||||||:||||:||||::||||||||:|||..|||.|||..|.|||:||:
RBAM_011070__     51 GAEAAKLFYDTERFQREHALPKRVQKTLFGTGAIQAMDGERHKHRKLLFM    100

BSNT_00371___    101 SLMTPPHQKRLAELMTEEWRAAVTRWEKADEVVLFEEAKEILCRVACYWA    150
                     ||||||.||||||.:.::|:|:...||.::.:|||:|||::|||.||.||
RBAM_011070__    101 SLMTPPRQKRLAEAVAKQWKASAEMWEGSNRIVLFDEAKKVLCRAACEWA    150

BSNT_00371___    151 GVPLKETEVKERAADFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIED    200
                     |||||::||||||.||.||||||||||||||||||||.:.|:|||.:|||
RBAM_011070__    151 GVPLKDSEVKERAEDFTDMVDAFGAVGPRHWKGRRARLKTEKWIEEVIED    200

BSNT_00371___    201 ARAGLLKTTPGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYF    250
                     .|:|.|:|..|:||:||||||:.||::|||.|||:|||||||||.|||||
RBAM_011070__    201 VRSGKLQTPEGSALYEMAFHTELDGNRLDSHMAAVELINVLRPIAAISYF    250

BSNT_00371___    251 LVFSALALHEHPKYKEWLRSGNSRKREMFVQEVRRYYPFGPFLGALVKKD    300
                     :.|||||||::|:|:..|||.:.::.|.|..||||||||.|||||:||||
RBAM_011070__    251 ITFSALALHDYPEYRGKLRSRDDQEAERFAHEVRRYYPFAPFLGAVVKKD    300

BSNT_00371___    301 FVWNNCEFKKGTSVLLDVYGTNHDPRLWDHPDEFRPERFAEREENPFDMI    350
                     |||.|||||||.||:||:||||||.|||::|:|||||||..||||.||.|
RBAM_011070__    301 FVWKNCEFKKGASVMLDLYGTNHDSRLWENPNEFRPERFQGREENKFDFI    350

BSNT_00371___    351 PQGGGHVEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARM    400
                     |||||....||||||||:|:||||.||.||.::||||||.|.|.:||:||
RBAM_011070__    351 PQGGGDPANGHRCPGEGMTVEVMKTSLAFLANEIEYDVPSQDLSFSLSRM    400

BSNT_00371___    401 PSLPESGFVMSGIRRKS    417
                     |:|||||||:|.:||. 
RBAM_011070__    401 PALPESGFVISDVRRI-    416


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.