Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01869 and RBAM_011130

See DNA alignment / Visit BSNT_01869 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_01869___yitU.1.9828.seq
#    -bsequence pep-align/RBAM_011130___yitU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01869___yitU-RBAM_011130___yitU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01869___yitU-RBAM_011130___yitU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01869___yitU
# 2: RBAM_011130___yitU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     218/270 (80.7%)
# Similarity:   244/270 (90.4%)
# Gaps:           0/270 ( 0.0%)
# Score: 1180.0
# 
#
#=======================================

BSNT_01869___      1 METKPYLIALDLDGTLLKDDKTISENTLQTIQRLKDDGHYVCISTGRPYR     50
                     ||||||||||||||||||||||||..|.:|||:||:.||:||||||||:|
RBAM_011130__      1 METKPYLIALDLDGTLLKDDKTISPETARTIQKLKEAGHHVCISTGRPFR     50

BSNT_01869___     51 SSSMYYQQMELTTPIVNFNGAFVHHPQDDSWGRYHTSLPLDVVKQLVDIS    100
                     ||||||.::.||||||||||||||||:|:|||||||||.:|||:||.:::
RBAM_011130__     51 SSSMYYDELGLTTPIVNFNGAFVHHPKDESWGRYHTSLSVDVVRQLAELT    100

BSNT_01869___    101 ESYNVHNVLAEVIDDVYFHYHDEHLIDAFNMNTTNVTVGDLRENLGEDVT    150
                     |:|.:|||||||||||||||||||||:||:|||.|||.|||||.:.||||
RBAM_011130__    101 ETYQIHNVLAEVIDDVYFHYHDEHLIEAFHMNTANVTFGDLRETVKEDVT    150

BSNT_01869___    151 SVLIHAKEEDVPAIRSYLSDVHAEVIDHRRWAAPWHVIEIIKSGMNKAVG    200
                     |||||||||||..||::|||||||||||||||||||||||||.|||||||
RBAM_011130__    151 SVLIHAKEEDVADIRAHLSDVHAEVIDHRRWAAPWHVIEIIKHGMNKAVG    200

BSNT_01869___    201 LQKISDYYGLPRERIIAFGDEDNDLEMLEFAGCGVAMGNGIDAVKQIANR    250
                     |:||||||.:||||||||||||||||||.|||||||||||.|.|||.|:|
RBAM_011130__    201 LKKISDYYQVPRERIIAFGDEDNDLEMLRFAGCGVAMGNGTDEVKQAADR    250

BSNT_01869___    251 TTATNEEDGVARFLKEYFSL    270
                     .|.:||.||:|.|||.||||
RBAM_011130__    251 VTGSNEADGIAEFLKSYFSL    270


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