Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01877 and RBAM_011180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_01877.1.9828.seq
# -bsequence pep-align/RBAM_011180___yitZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01877-RBAM_011180___yitZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01877-RBAM_011180___yitZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01877
# 2: RBAM_011180___yitZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 97/180 (53.9%)
# Similarity: 103/180 (57.2%)
# Gaps: 62/180 (34.4%)
# Score: 480.5
#
#
#=======================================
BSNT_01877 1 MGKNKLKWLTLSQSSVFFASSLIFPFYILFVKNIGSSYTQFGFSYGLFGL 50
|..|.||||.|||||||||.||||||||||:|||||||||||.|||||||
RBAM_011180__ 1 MKHNHLKWLILSQSSVFFAGSLIFPFYILFIKNIGSSYTQFGLSYGLFGL 50
BSNT_01877 51 SGALIYPLLGRLSERFDSRYFLLLNSWGMAVLLLYVPHIGSVVQVYIVQV 100
|||||:|||||||.|.|||:||:.||||||||||.:|||..|.|||:|||
RBAM_011180__ 51 SGALIHPLLGRLSARLDSRWFLMANSWGMAVLLLTLPHITGVHQVYVVQV 100
BSNT_01877 101 LLGLFGAMQKHGEK--SADR------------------------------ 118
|||||||||||||| .||.
RBAM_011180__ 101 LLGLFGAMQKHGEKIMIADYTDGGERGKKVGSYHFWTAVFSAAAIILGGF 150
BSNT_01877 118 ------------------------------ 118
RBAM_011180__ 151 LADFFTVYIIFYASSVLFFISGLMMLKKTG 180
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