Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01929 and RBAM_011530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_01929___yjbF.1.9828.seq
# -bsequence pep-align/RBAM_011530___yjbF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01929___yjbF-RBAM_011530___yjbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01929___yjbF-RBAM_011530___yjbF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01929___yjbF
# 2: RBAM_011530___yjbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 386
# Identity: 183/386 (47.4%)
# Similarity: 246/386 (63.7%)
# Gaps: 3/386 ( 0.8%)
# Score: 955.0
#
#
#=======================================
BSNT_01929___ 1 MFSAVTEDGQMFHLLGAQQNQK---LKRRRFFCPVCGGELAVKLGLQKAP 47
||||||.||::..|.|:...:| |:::|:|||||..||.:|||.:|.|
RBAM_011530__ 1 MFSAVTADGRLIQLAGSYSKEKAAELRKKRWFCPVCESELDIKLGREKLP 50
BSNT_01929___ 48 HFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEPYIRTINQ 97
|||||:::.|..:.||||.|||||||||::|||||..|..||||:.:..|
RBAM_011530__ 51 HFAHKKSRLCPGESEPESEYHLEGKRQLFLWLKTQGCSVSLEPYLTSAGQ 100
BSNT_01929___ 98 RPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRL 147
|||:.|...|..||.|:|||.::.|..:.||.|.|..|..|.||:|..||
RBAM_011530__ 101 RPDLTAESGEERLAFEFQCANLSADSLKSRTAGLKNAGYRPVWIIGAKRL 150
BSNT_01929___ 148 KRTASSFYQLSAFHWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHS 197
||.|:.|::||||||||.....:..|:.|||:.|||.||..|.||||.:|
RBAM_011530__ 151 KRMAAQFFRLSAFHWQFFEVHSFSSLLFYCPDARSFYRLHSITPFYTGYS 200
BSNT_01929___ 198 YSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKEI 247
|:.:..||:|:|...|:...|.:.|::...|.:|:..||.|..||.|:|.
RBAM_011530__ 201 YAGLTAIPLHKANLKDICHPEGRHSVRLPSWGRAVAGFRSKSGRFLSEEA 250
BSNT_01929___ 248 NRLRLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDL 297
..:|.||||:.|.:|.|||:|||:||..|.||.||||||||.|||.:.:|
RBAM_011530__ 251 GLIRRLFYERHQVAFPFLPSEVFIPVSAGFVFASPVFVWQGHLYLRLAEL 300
BSNT_01929___ 298 GGKRAPIRFSAVLQQCKLHIHNKNIALRFECSEECLSEAVKQYIDFLCKK 347
..|.||||.|.::...:..|..|.|.:|:...:..:..|||||.||||.:
RBAM_011530__ 301 SKKGAPIRISGMVHDLRQKIRRKEIRMRYGSQDSLIRMAVKQYADFLCLQ 350
BSNT_01929___ 348 GFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE 383
.||||.:.|||:.:.......:.::|..||...|.|
RBAM_011530__ 351 DFLREIENEVYMPSSQRKLPQTAEELRRRDLLFFGE 386
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