Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01963 and RBAM_011760

See DNA alignment / Visit BSNT_01963 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_01963___cotY.1.9828.seq
#    -bsequence pep-align/RBAM_011760___cotY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01963___cotY-RBAM_011760___cotY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01963___cotY-RBAM_011760___cotY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01963___cotY
# 2: RBAM_011760___cotY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:     142/162 (87.7%)
# Similarity:   148/162 (91.4%)
# Gaps:           2/162 ( 1.2%)
# Score: 803.0
# 
#
#=======================================

BSNT_01963___      1 MSCGKTHGRHENCVCDAVEKILAEQEAVEEQCPTGCYTNLLNPTIAGKDT     50
                     |||||.|||.|||||||||||||||||||||||||||||||:||:.||||
RBAM_011760__      1 MSCGKHHGRDENCVCDAVEKILAEQEAVEEQCPTGCYTNLLSPTVTGKDT     50

BSNT_01963___     51 IPFLLFDKKGGLFSTFGNVGGFVDDMQCFESIFFRVEKLCDCCATLSILR    100
                     ||||||||||||||||||||||.||.|||||||||.|::||||||||:||
RBAM_011760__     51 IPFLLFDKKGGLFSTFGNVGGFADDSQCFESIFFRAERVCDCCATLSVLR    100

BSNT_01963___    101 PVDVKGDTLSVCHPCDPDFFGLEKTDFCIEVDLGCFCAIQCLSPELVDRT    150
                     ||||.||||||||||||||||||||||||||||.||.||||||||||||.
RBAM_011760__    101 PVDVHGDTLSVCHPCDPDFFGLEKTDFCIEVDLSCFSAIQCLSPELVDRP    150

BSNT_01963___    151 SPHKDKKHHHNG    162
                     .|||:||||.  
RBAM_011760__    151 EPHKEKKHHG--    160


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