Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00984 and RBAM_013100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence pep-align/BSNT_00984___ydhD.1.9828.seq
# -bsequence pep-align/RBAM_013100___ydhD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00984___ydhD-RBAM_013100___ydhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00984___ydhD-RBAM_013100___ydhD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00984___ydhD
# 2: RBAM_013100___ydhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 305/420 (72.6%)
# Similarity: 347/420 (82.6%)
# Gaps: 0/420 ( 0.0%)
# Score: 1650.0
#
#
#=======================================
BSNT_00984___ 1 MFIHIVGPGDSLFSIGRRYGASVDQIRGVNGLDETNIVPGQALLIPLYVY 50
||:|.|..|||||||.|:||..||.||.||||:||||||||||||||..|
RBAM_013100__ 1 MFVHTVQSGDSLFSISRKYGYPVDSIRSVNGLEETNIVPGQALLIPLNEY 50
BSNT_00984___ 51 TVQPGDTLTAIAAKAFVPLERLRAANPGISPNALQAGAKITIPSISNYIA 100
||||.||...||.||:||..:|..|||.|.||.|:||.|:.||.||||:|
RBAM_013100__ 51 TVQPNDTYAVIAGKAYVPQMQLMQANPDIPPNRLRAGMKVKIPDISNYLA 100
BSNT_00984___ 101 GTLSFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNGDIANQLNDAAA 150
|||.|||:|.|:.|||||||:|||||:||:||||...||||.|.|||..|
RBAM_013100__ 101 GTLQFYVIRTPEADRELINDFAPYSSAISLFEYHFGSNGDIINDLNDRTA 150
BSNT_00984___ 151 IETTWQRRVTPLATITNLTSGGFSTEIVHQVLNNPTARTNLVNNIYDLVS 200
||||||.||.|||.|||||.||||.|:.||||.||||||||||||..|..
RBAM_013100__ 151 IETTWQNRVRPLAVITNLTEGGFSPELAHQVLQNPTARTNLVNNIVSLTV 200
BSNT_00984___ 201 TRGYGGVTIDFEQVSAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSD 250
.:|||||.||||:|..|||||||||||||:.||......|||:|||||||
RBAM_013100__ 201 RKGYGGVNIDFERVREADRDLFTGFLRQLKTRLSEHQLALTISVPAKTSD 250
BSNT_00984___ 251 NIPWLRGYDYGGIGAVVNYMFIMAYDWHHAGSEPGPVAPITEIRRTIEFT 300
.:|||||||||||||||:|||||||||||||||||||||:||:|:||.|.
RBAM_013100__ 251 AVPWLRGYDYGGIGAVVDYMFIMAYDWHHAGSEPGPVAPLTEVRQTINFA 300
BSNT_00984___ 301 IAQVPSRKIIIGVPLYGYDWIIPYQPGTVASAISNQNAIERAMRYQSPIQ 350
|::||.||:|:|||||||||:|||:|||:.||||||.|:|.||::||.|:
RBAM_013100__ 301 ISRVPRRKVILGVPLYGYDWVIPYRPGTIGSAISNQRAMEMAMKHQSVIR 350
BSNT_00984___ 351 YSAEYQSPFFRYSDQQGRTHEVWFEDVRSMSRKMQIVREYRLQAIGAWQL 400
||.:.:||:|||:|:.|||||||||||||||.||.:|||:.|||||||||
RBAM_013100__ 351 YSQQERSPYFRYTDENGRTHEVWFEDVRSMSEKMVLVREFGLQAIGAWQL 400
BSNT_00984___ 401 TLGFTPGPWLLRKFFTIRKV 420
||||.|||||||.||||||:
RBAM_013100__ 401 TLGFKPGPWLLRNFFTIRKI 420
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