Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02365 and RBAM_013950

See DNA alignment / Visit BSNT_02365 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02365___ykuQ.1.9828.seq
#    -bsequence pep-align/RBAM_013950___ykuQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02365___ykuQ-RBAM_013950___ykuQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02365___ykuQ-RBAM_013950___ykuQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02365___ykuQ
# 2: RBAM_013950___ykuQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     218/236 (92.4%)
# Similarity:   232/236 (98.3%)
# Gaps:           0/236 ( 0.0%)
# Score: 1115.0
# 
#
#=======================================

BSNT_02365___      1 MKMMDANEIISFIQNSTKSTPVKVYVKGELEGINFGESAKAFINGNTGVV     50
                     ||||||||||||||||||||||||||||:||||:||:|||.|:||.:|||
RBAM_013950__      1 MKMMDANEIISFIQNSTKSTPVKVYVKGDLEGISFGDSAKTFLNGQSGVV     50

BSNT_02365___     51 FGEWSEIQTAIEENQSKIEDYVVENDRRNSAIPMLDLKNIKARIEPGAII    100
                     ||||:||::.||||:.||||||:|||||||||||||||::||||||||||
RBAM_013950__     51 FGEWAEIKSVIEENKDKIEDYVIENDRRNSAIPMLDLKDVKARIEPGAII    100

BSNT_02365___    101 RDQVEIGDNAVIMMGASINIGSVIGEGTMIDMNVVLGGRATVGKNCHIGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_013950__    101 RDQVEIGDNAVIMMGASINIGSVIGEGTMIDMNVVLGGRATVGKNCHIGA    150

BSNT_02365___    151 GSVLAGVIEPPSAKPVVIEDDVVIGANAVVLEGVTVGKGAVVAAGAIVVN    200
                     |||||||||||||||||:|||||||||||||||||:||||||||||||||
RBAM_013950__    151 GSVLAGVIEPPSAKPVVVEDDVVIGANAVVLEGVTIGKGAVVAAGAIVVN    200

BSNT_02365___    201 DVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL    236
                     ||||||||||||||||||||||||||||||||||||
RBAM_013950__    201 DVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL    236


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