Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02519 and RBAM_015100

See DNA alignment / Visit BSNT_02519 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence pep-align/BSNT_02519___divIB.1.9828.seq
#    -bsequence pep-align/RBAM_015100___divIB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02519___divIB-RBAM_015100___divIB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02519___divIB-RBAM_015100___divIB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02519___divIB
# 2: RBAM_015100___divIB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     209/263 (79.5%)
# Similarity:   238/263 (90.5%)
# Gaps:           1/263 ( 0.4%)
# Score: 1073.0
# 
#
#=======================================

BSNT_02519___      1 MNPGQDREKIVNIEERIPKIKEQRKQKANRRLISFIMLFFIMVLIIVYLQ     50
                     |||..:||||||||||||||||||||||||||||||:|||:|||||||||
RBAM_015100__      1 MNPNHEREKIVNIEERIPKIKEQRKQKANRRLISFIVLFFMMVLIIVYLQ     50

BSNT_02519___     51 TPISKVSTISVTGNENVSKKEIIDLSDINSGDTEFWSLDKQKTEKKIQQN    100
                     .||||||:::|:||||||.|||..||||::|.||||||:|::||:||:||
RBAM_015100__     51 MPISKVSSVTVSGNENVSVKEINALSDIHNGQTEFWSLNKKQTEEKIEQN    100

BSNT_02519___    101 KLVKKAEISKSLPNKINIAIEEYKAIAYLEKDDVYYEVLENGSVLPNEVT    150
                     |||||||:||..|||::|.|||||.||||::.||||||||||:|||||||
RBAM_015100__    101 KLVKKAELSKVFPNKVSIHIEEYKTIAYLQRHDVYYEVLENGTVLPNEVT    150

BSNT_02519___    151 PDDAGPILVNWTNAKKRSQMAKQLDALSKSLKQSISEIYYTPVKMDENRI    200
                     |||||||||:|||||||.:||:|||.||.|||||||||||||||||::||
RBAM_015100__    151 PDDAGPILVDWTNAKKRVKMAEQLDKLSGSLKQSISEIYYTPVKMDQDRI    200

BSNT_02519___    201 KLYMNDGYVVTASIKTFADRMKTYPSIISQLSSNKKGIIHLEVATYFEEF    250
                     ||||||||||||||||||.||||||||:|||...||||||||||||||||
RBAM_015100__    201 KLYMNDGYVVTASIKTFAGRMKTYPSIVSQLDGGKKGIIHLEVATYFEEF    250

BSNT_02519___    251 GKNDKAAKKEDEN    263
                     .|...:.|||:: 
RBAM_015100__    251 NKGKSSKKKEND-    262


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