Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02943 and RBAM_018020

See DNA alignment / Visit BSNT_02943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_02943___yndG.1.9828.seq
#    -bsequence pep-align/RBAM_018020___yndG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02943___yndG-RBAM_018020___yndG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02943___yndG-RBAM_018020___yndG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02943___yndG
# 2: RBAM_018020___yndG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     171/271 (63.1%)
# Similarity:   202/271 (74.5%)
# Gaps:           3/271 ( 1.1%)
# Score: 899.5
# 
#
#=======================================

BSNT_02943___      1 MRQKPIYVEIEMKSDLDTLWEYTQNPSLHKEWDLRFSNITYLNSQPCEKQ     50
                     |:||||||||.:.||::|||||||||.||||||||||:||||:..|.|.|
RBAM_018020__      1 MKQKPIYVEINIASDIETLWEYTQNPHLHKEWDLRFSDITYLHRLPDEPQ     50

BSNT_02943___     51 KFLYETRVGFGLKVSGTGETVRVFNKCSSERSSSLAFGSDHPLSLIRHGS    100
                     :||||||:|||||||||||::......||||.|||||.||||||||:.|.
RBAM_018020__     51 RFLYETRIGFGLKVSGTGESIGDIRPRSSERVSSLAFASDHPLSLIKEGR    100

BSNT_02943___    101 GYWKYIQRENGKMTFLTQYQYKTAYGLLGRWIDRLLFRPLLGWATAWSFD    150
                     ||||||:|:||:..|||||||:||.||.|.||||.||||||.||||||||
RBAM_018020__    101 GYWKYIERDNGQTAFLTQYQYETARGLPGSWIDRFLFRPLLSWATAWSFD    150

BSNT_02943___    151 ALRLWVEQNKHPKRFIRSAIIYVFMCLFFSLFWFYQGF--AGVETSILAG    198
                     |||||:|||:|||...|...:||||||.|||:||:|||  ...:..|:.|
RBAM_018020__    151 ALRLWIEQNRHPKISFRFGFVYVFMCLVFSLYWFFQGFHDGCADAEIVRG    200

BSNT_02943___    199 TAEIGLAILWLLPLKRKWIIHGVQACIFAGFACLGSEIFMWILLSVFSAA    248
                     ..|.||.:|||||::|||:||..|:..|...|.|.|.....|.|.|.:.|
RBAM_018020__    201 ALETGLGVLWLLPMRRKWLIHTGQSVFFCVTALLYSGGGFVISLGVLTIA    250

BSNT_02943___    249 SGALSLQLPSARRTKRKRKK-    268
                     :..|..:||||..|||||:. 
RBAM_018020__    251 AMILKPKLPSAWHTKRKREVK    271


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