Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03081 and RBAM_018740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_03081___yoaB.1.9828.seq
# -bsequence pep-align/RBAM_018740___yoaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03081___yoaB-RBAM_018740___yoaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03081___yoaB-RBAM_018740___yoaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03081___yoaB
# 2: RBAM_018740___yoaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 418
# Identity: 307/418 (73.4%)
# Similarity: 342/418 (81.8%)
# Gaps: 35/418 ( 8.4%)
# Score: 1641.5
#
#
#=======================================
BSNT_03081___ 1 -MDKIGIPKRLAWGFLGVVLFMMGDGLEQGWLSPFLIENGLTVQQSASIF 49
::||||||:||||||||||||||||||||||||||:|||||||||||:|
RBAM_018740__ 1 MLNKIGIPKQLAWGFLGVVLFMMGDGLEQGWLSPFLVENGLTVQQSASLF 50
BSNT_03081___ 50 SIYGIALAIASWFSGVCLEAFGAKRTMFMGLLFYVIGTAAFIVFGFEQLN 99
::|||:||:|||||||||||||||||||||||||||||||||.:|||.||
RBAM_018740__ 51 TVYGISLAVASWFSGVCLEAFGAKRTMFMGLLFYVIGTAAFIAYGFENLN 100
BSNT_03081___ 100 LPVMYVTYFVKGLGYPLFAYSFLTWVIYRTPQSKLSTAVGWFWIAYCLGM 149
|.|||||||:|||||||||||||||||||:|:::|||||||||||||.||
RBAM_018740__ 101 LSVMYVTYFIKGLGYPLFAYSFLTWVIYRSPKNRLSTAVGWFWIAYCCGM 150
BSNT_03081___ 150 FVFGAWYSSYAIKAFGYLNTLWSSIFWVCLGAFFALFINKDRFEKKKRKR 199
|||||||||:|||:||||||||||||||||||||||.:|:|||||||..:
RBAM_018740__ 151 FVFGAWYSSWAIKSFGYLNTLWSSIFWVCLGAFFALILNRDRFEKKKADK 200
BSNT_03081___ 200 SETAEELLKGVTILFTNPRVLTGGIIRIINSIGTYGFPVFLPMHMAQHGI 249
.|.|:||:||:|||..|||||:||||||||||||||||||||||||||||
RBAM_018740__ 201 REKAQELMKGITILAENPRVLSGGIIRIINSIGTYGFPVFLPMHMAQHGI 250
BSNT_03081___ 250 STNVWLQIWGTIFLGNIVFNLIFGIVGDKFGWKNTVIWFGGVGCGIFTLL 299
||||||||||||||||||||||||.|||.||||.||:|||||||||||||
RBAM_018740__ 251 STNVWLQIWGTIFLGNIVFNLIFGAVGDAFGWKKTVMWFGGVGCGIFTLL 300
BSNT_03081___ 300 LYYAPVFSGGSLAVVSVIGFIWGGLLAGYVPIGAIVPTVAGKDKGAAMSV 349
||||||.|.|:|..||::||||||||||:|||||||||.||.|||||...
RBAM_018740__ 301 LYYAPVVSHGNLLFVSIVGFIWGGLLAGFVPIGAIVPTAAGSDKGAAHVC 350
BSNT_03081___ 350 LNLAAG----LSAFVGPALAWLFIGLVGAQGVVWIFAALYLASAVLTKCI 395
:....| ||| |.|.....|| .|...::.|:...::
RBAM_018740__ 351 VKSGCGPCRHLSA---PRLPGRSSGL-SAHKALYGFSQRSIS-------- 388
BSNT_03081___ 396 HIPEEKAVKEETSPQYAS 413
RBAM_018740__ 388 ------------------ 388
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