Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03118 and RBAM_018920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence pep-align/BSNT_03118.1.9828.seq
# -bsequence pep-align/RBAM_018920___yocB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03118-RBAM_018920___yocB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03118-RBAM_018920___yocB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03118
# 2: RBAM_018920___yocB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity: 95/261 (36.4%)
# Similarity: 112/261 (42.9%)
# Gaps: 125/261 (47.9%)
# Score: 489.0
#
#
#=======================================
BSNT_03118 0 -------------------------------------------------- 0
RBAM_018920__ 1 MAIDSLIGKLKYVMTESPDKMLSLYVNTDMRNPDQQGGEWKIALKTGFRR 50
BSNT_03118 0 -------------------------------------------------- 0
RBAM_018920__ 51 LKEYLSASDPEEKKSLVRIMERVYQYIEGLGKEMPRSLVFFASGEGGIWE 100
BSNT_03118 1 -------------------------MRQAYPSTAFILTQQHEVKIIETVL 25
:|:.:||||||||||:|||||||||
RBAM_018920__ 101 TIQLQVPVETRFYWEEAAVLDQLELLREQFPSTAFILTQQNEVKIIETVL 150
BSNT_03118 26 GKIEAVERYEYDMINESWKNSHSAVDKAPPFEENRMREHVTENQSRLYKR 75
||||.||.|.||:||||||....:...:...:|:..:.||.|||:|||||
RBAM_018920__ 151 GKIEGVEHYHYDVINESWKPQDVSGSSSASMDEDAAKAHVEENQNRLYKR 200
BSNT_03118 76 LAASLDQKAAAKRWERMVIAGDKETADILDQHMNKPIHSKIQKNLLNENE 125
||::||||||:.:|||:||||||||||||||||||||...|.||||||||
RBAM_018920__ 201 LASNLDQKAASHQWERLVIAGDKETADILDQHMNKPIDRIIPKNLLNENE 250
BSNT_03118 126 HKVIEHLIKEA 136
|||||.|:|||
RBAM_018920__ 251 HKVIEELLKEA 261
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