Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03219 and RBAM_019540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:17
# Commandline: needle
# -asequence pep-align/BSNT_03219___yodQ.1.9828.seq
# -bsequence pep-align/RBAM_019540___yodQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03219___yodQ-RBAM_019540___yodQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03219___yodQ-RBAM_019540___yodQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03219___yodQ
# 2: RBAM_019540___yodQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 434
# Identity: 332/434 (76.5%)
# Similarity: 377/434 (86.9%)
# Gaps: 1/434 ( 0.2%)
# Score: 1827.0
#
#
#=======================================
BSNT_03219___ 1 MQDIERKVIEWLDQHSAKAIRLLKRLIGEKSTLGSEFNAQAVVLEKLRQF 50
|..:|.||.||.::::|||:.|||||||||||.|.|||||||||||||||
RBAM_019540__ 1 MDQLEEKVTEWAEENTAKAVSLLKRLIGEKSTFGHEFNAQAVVLEKLRQF 50
BSNT_03219___ 51 HMDIDVWEPSIKQLKQHPYFKSNRSDFHESPNIVAKKTGAGEGRSLILNG 100
.|||||||||:|.||:||||.|.|.||||||||.|.|.|||.||||||||
RBAM_019540__ 51 DMDIDVWEPSVKHLKEHPYFVSEREDFHESPNITAVKKGAGGGRSLILNG 100
BSNT_03219___ 101 HIDVVPEGSVKDWKYEPYQAVEENGKIYGRGSTDMKGGNTALLFALEALH 150
||||||||:...|.|||:.|||::||:||||||||||||||||||||||.
RBAM_019540__ 101 HIDVVPEGNPAAWTYEPFTAVEKDGKVYGRGSTDMKGGNTALLFALEALE 150
BSNT_03219___ 151 ACDVKLKGDVLFQSVVDEECGGAGTLSAIMRGYRADGALIPEPTNMKLFI 200
||.:.|||||||||||||||||||||||:||||:|||||||||||:|||:
RBAM_019540__ 151 ACGITLKGDVLFQSVVDEECGGAGTLSAVMRGYKADGALIPEPTNLKLFV 200
BSNT_03219___ 201 KQQGSMWFRITVKGLSAHGGTRYEGVSAIEKSMHVITALQELEKVRNARI 250
||||||||||||:|||||||||||||||||||:||||||:|||.||||||
RBAM_019540__ 201 KQQGSMWFRITVRGLSAHGGTRYEGVSAIEKSLHVITALKELEHVRNARI 250
BSNT_03219___ 251 SDPLYDNIPIPVPVNIGTISGGAWPSSVADRVVIEGRCGIAPHEKTEAVK 300
:||||.::|||||:||||:.||.|||||||||||||||||||.|..||||
RBAM_019540__ 251 TDPLYRDVPIPVPINIGTVQGGTWPSSVADRVVIEGRCGIAPDETPEAVK 300
BSNT_03219___ 301 LELENWLKDLEYHDEWFKRHPVQVEWFGAQWLPNDLPDDHPLISVLQSAY 350
.||.:|||||||.|||||.||.::||||||||||||||:|||||.|:|::
RBAM_019540__ 301 EELASWLKDLEYRDEWFKHHPAEIEWFGAQWLPNDLPDEHPLISALESSF 350
BSNT_03219___ 351 QKMKQTEPIIEASPWGTDGGLLYHAGDTPVIVFGPGETKTAHQANEYIEV 400
:|||..:|:.||||||||||||.|||.||||||||||.|.|||||||||:
RBAM_019540__ 351 EKMKGAKPVREASPWGTDGGLLQHAGQTPVIVFGPGEVKAAHQANEYIEI 400
BSNT_03219___ 401 EAMIESAKIIALFVMDWCGLHTDGEDADAQVNKE 434
.|:|::.|||:||:|:|||:...|:.||.....
RBAM_019540__ 401 RALIDAVKIISLFIMEWCGVADGGDGADKGTEG- 433
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