Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00959 and RBAM_020230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence pep-align/BSNT_00959.1.9828.seq
# -bsequence pep-align/RBAM_020230___ydfR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00959-RBAM_020230___ydfR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00959-RBAM_020230___ydfR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00959
# 2: RBAM_020230___ydfR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 66/194 (34.0%)
# Similarity: 85/194 (43.8%)
# Gaps: 83/194 (42.8%)
# Score: 329.0
#
#
#=======================================
BSNT_00959 0 -------------------------------------------------- 0
RBAM_020230__ 1 MRFAWEELIIIAFGMILLRISGRKSIAQMTIAQTMVMISIGTIIVHPILE 50
BSNT_00959 1 --------------------------------MLTGEAKVVIENGQLHIE 18
.|||::|.|||:|||:||
RBAM_020230__ 51 TSLLKTLIAASILFSALILMEWFQVKVNWIESFLTGKSKFVIEDGQLNIE 100
BSNT_00959 19 NLKKMRLTVDQLEMQLRLHGVTGIQDVKIATLEANGQLGIELTDDAKPLT 68
||||:|||.|||||:|||.|::.|..:|.||||||||||.||.||.||||
RBAM_020230__ 101 NLKKLRLTADQLEMRLRLLGISNINTIKYATLEANGQLGYELKDDCKPLT 150
BSNT_00959 69 VRDLKKLIHPDFINKDGQAQSGNQ-NIFDEVGKKNKKNVPKKLH 111
::|||.:|.|..:||:.|.|..:| |||:|:.|...::.||.|.
RBAM_020230__ 151 IKDLKNVIDPKCLNKEPQPQKDDQANIFEEIKKHQTQHKPKNLE 194
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