Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03414 and RBAM_021090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence pep-align/BSNT_03414___ypdC.1.9828.seq
# -bsequence pep-align/RBAM_021090___ypdC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03414___ypdC-RBAM_021090___ypdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03414___ypdC-RBAM_021090___ypdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03414___ypdC
# 2: RBAM_021090___ypdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 199/218 (91.3%)
# Similarity: 209/218 (95.9%)
# Gaps: 0/218 ( 0.0%)
# Score: 1064.0
#
#
#=======================================
BSNT_03414___ 1 MFAIISAGIAPGIALLSYFYLKDQYDNEPVHMVLRSFFLGVVLVFPIMFI 50
||||||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_021090__ 1 MFAIISAGIAPGIALLSYFYLKDQYDNEPVHMVLRSFFLGVVLVFPTMFI 50
BSNT_03414___ 51 QYVLEKENVGGGSFFVSFLSSGFLEESLKWFILMISVYPHAHFDEHYDGI 100
|||||||:|||||||||||||||||||:|||:||||||||||||||||||
RBAM_021090__ 51 QYVLEKEHVGGGSFFVSFLSSGFLEESVKWFVLMISVYPHAHFDEHYDGI 100
BSNT_03414___ 101 VYGTSVSLGFATLENILYLIGHGVEHAFVRALLPVSCHALIGVIMGFYLG 150
|||.|||||||||||||||.||||||||:|||||||||||||||||||||
RBAM_021090__ 101 VYGASVSLGFATLENILYLFGHGVEHAFIRALLPVSCHALIGVIMGFYLG 150
BSNT_03414___ 151 KARFSADKARVKWLTLSLVVPSLLHGSYDFILTALSNWIYYMLPFMVFLW 200
|||||..||||||..:||.|||.||||||||||||::|:|||||||:|||
RBAM_021090__ 151 KARFSQKKARVKWFVISLAVPSCLHGSYDFILTALNHWVYYMLPFMLFLW 200
BSNT_03414___ 201 WFGLRKAKKARSVNMMQV 218
|||||||||||||||:||
RBAM_021090__ 201 WFGLRKAKKARSVNMIQV 218
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