Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03774 and RBAM_023610

See DNA alignment / Visit BSNT_03774 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:04
# Commandline: needle
#    -asequence pep-align/BSNT_03774___dgkA.1.9828.seq
#    -bsequence pep-align/RBAM_023610___dgkA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03774___dgkA-RBAM_023610___dgkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03774___dgkA-RBAM_023610___dgkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03774___dgkA
# 2: RBAM_023610___dgkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:      94/126 (74.6%)
# Similarity:   109/126 (86.5%)
# Gaps:           3/126 ( 2.4%)
# Score: 516.0
# 
#
#=======================================

BSNT_03774___      1 --MDSKDHRNELNRFFKSFVHAGRGIWETVRTERNFQFHAAAACAVLICG     48
                       |||:||:||.:||.||||||.||||:|.|:|||||||..|||||::||
RBAM_023610__      1 MSMDSRDHKNEWSRFLKSFVHAWRGIWKTARSERNFQFHITAACAVIVCG     50

BSNT_03774___     49 FLVELSMIEWMIIFLLIGGMFSLELLNTAIEHTVDLITDKHHPLAKAAKD     98
                     ||..||..||.::.:|||||.:||||||||||.|||:||::|||||||||
RBAM_023610__     51 FLTGLSTAEWAVVLMLIGGMLALELLNTAIEHVVDLVTDQYHPLAKAAKD    100

BSNT_03774___     99 AAAGAVCVFAVISCIIGLLIFLPKL-    123
                     ||||||||||||||||||||||||: 
RBAM_023610__    101 AAAGAVCVFAVISCIIGLLIFLPKIC    126


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