Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03818 and RBAM_023960

See DNA alignment / Visit BSNT_03818 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence pep-align/BSNT_03818___aroD.1.9828.seq
#    -bsequence pep-align/RBAM_023960___aroE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03818___aroD-RBAM_023960___aroE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03818___aroD-RBAM_023960___aroE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03818___aroD
# 2: RBAM_023960___aroE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     209/280 (74.6%)
# Similarity:   243/280 (86.8%)
# Gaps:           0/280 ( 0.0%)
# Score: 1100.0
# 
#
#=======================================

BSNT_03818___      1 MKKLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKG     50
                     ||:||||||||||||||||||||:|:|..::|.|.||:||...|:|||.|
RBAM_023960__      1 MKQLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNG     50

BSNT_03818___     51 IRALGVQGINVTVPHKVSIMDYLDHIDESAKVIGAVNTVRREGDKLVGYN    100
                     |:|||:.|:||||||||:||::||.|.|||||:||||||:||||:|:|||
RBAM_023960__     51 IKALGICGVNVTVPHKVAIMEHLDEIHESAKVLGAVNTVKREGDRLIGYN    100

BSNT_03818___    101 TDGEGFVKSLMKVLDKPISELSFLMIGAGGAARAIFTTIVRNTPKKFDIC    150
                     |||:||.|||:|||||||||||.||||||||||||||||||..||:||:|
RBAM_023960__    101 TDGDGFYKSLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQFDVC    150

BSNT_03818___    151 NRTLEKAKRLTEATPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNV    200
                     |||.|||:.|..|.|||..|..|::||||.:|||||||||||||||||..
RBAM_023960__    151 NRTPEKAESLIAAAPSFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKT    200

BSNT_03818___    201 DDVPLSLQRAASSAVVCDIVYNPIQTALLKEASQKGLKTLDGVGMFVEQA    250
                     |.|||||:||.:.|:||||||||||||.||||.::||.||||||||||||
RBAM_023960__    201 DAVPLSLERAKTGAIVCDIVYNPIQTAFLKEAEKRGLTTLDGVGMFVEQA    250

BSNT_03818___    251 ALSFQLWTGQEPDIEKMRSIVIGKLGGTEC    280
                     ||||:|||.||||...||:||:||||||:|
RBAM_023960__    251 ALSFKLWTEQEPDSGLMRAIVVGKLGGTQC    280


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