Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02054 and RBAM_024010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence pep-align/BSNT_02054___yjeA.1.9828.seq
# -bsequence pep-align/RBAM_024010.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02054___yjeA-RBAM_024010.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02054___yjeA-RBAM_024010.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02054___yjeA
# 2: RBAM_024010
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 89/482 (18.5%)
# Similarity: 132/482 (27.4%)
# Gaps: 253/482 (52.5%)
# Score: 320.5
#
#
#=======================================
BSNT_02054___ 1 MLAKRIKWFHVLIAVVCVVGLIGFFHNHSLKKETVMNKVRTDSQYGNVEI 50
RBAM_024010 0 -------------------------------------------------- 0
BSNT_02054___ 51 ATLVHDGKTFNYAVNYPVFKNEKMDSALKRFAEKEVRQFQKETKDVDQEH 100
RBAM_024010 0 -------------------------------------------------- 0
BSNT_02054___ 101 TTKRNELNVDYKIVHYAKQTVAIVFNEYKYIGGAHGQTVKKTFNYDFSKQ 150
RBAM_024010 0 -------------------------------------------------- 0
BSNT_02054___ 151 AFLSIDDIFKEDADYIHKLSLIAYHELKKNKDIAADDALLKEGTAPKVEN 200
..|.|.:.:|.. |.....::||...||.....|..|
RBAM_024010 1 ------------MRYFHLIIMICV--LTSLTAVSADAKSLKRSDMEKTGN 36
BSNT_02054___ 201 FSRFAIKEDYIELYFDTYQVAAGYLGEQSIAIKKSLLKDILKEQYIDKAK 250
:|:|
RBAM_024010 37 ------------VYWD---------------------------------- 40
BSNT_02054___ 251 NKNKIKEQKPKHEVISLPKEETVDPNQKVIALTFDDGPNPATTNQILDSL 300
|:.:|.| ::|||||||:|..|..:||.|
RBAM_024010 41 ----IRSEKKK------------------LSLTFDDGPHPVYTEAVLDVL 68
BSNT_02054___ 301 KKYKGHATFFVLGSRVQYYPETLIRMLKEGNEVGNHSWSHPLLTRLSVKE 350
|::...||||.:|||:..||.|..|:::||:|:|||:.:|....||..|:
RBAM_024010 69 KQHNVKATFFCVGSRIDKYPITAKRIVEEGHEIGNHTMNHVYFHRLKRKD 118
BSNT_02054___ 351 ALKQINDTQDIIEKISGYRPTLVRPPYGGIN-DELRSQMKMDVAL----W 395
.|::::.:...|..:......|.|||.|.:| ...:|.:|....: |
RBAM_024010 119 VLQELHSSAHHITSLQPEGDKLFRPPGGSLNHTAFKSILKEGYHIIMWSW 168
BSNT_02054___ 396 DVDPEDWKDRNKKTIVDRVMNQAGDGRTILIHD---IYRTSADAADEIIK 442
:.||.|||...|..||..|::.|.||..:|:|| ..|.:.:|..|||.
RBAM_024010 169 NQDPRDWKRPGKGKIVRHVVSHARDGDIVLLHDGGGNRRQTVEALKEIIP 218
BSNT_02054___ 443 KLTDQGYQLVTVSQL-------EEVKKQREAK 467
||..|||..|.||.| ..::
RBAM_024010 219 KLKKQGYTFVKVSDLIGQDSGPFHIQ------ 244
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