Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03946 and RBAM_024300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence pep-align/BSNT_03946___yrhG.1.9828.seq
# -bsequence pep-align/RBAM_024300___yrhG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03946___yrhG-RBAM_024300___yrhG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03946___yrhG-RBAM_024300___yrhG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03946___yrhG
# 2: RBAM_024300___yrhG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity: 222/266 (83.5%)
# Similarity: 246/266 (92.5%)
# Gaps: 0/266 ( 0.0%)
# Score: 1171.0
#
#
#=======================================
BSNT_03946___ 1 MAFRKPDEIAEAAIEAGMKKIKLPLPSLLALGFLGGAFIALGYLLDIRVI 50
|||||||||||.|:|:|:||:..||.:|:.||||||||||||||||||||
RBAM_024300__ 1 MAFRKPDEIAELAVESGVKKVHSPLSALIVLGFLGGAFIALGYLLDIRVI 50
BSNT_03946___ 51 GDLPKEWGSLSSLIGAAVFPVGLILVVLAGAELITGNMMSVAMALFSRKI 100
||||||||||||||||:|||:||:|||||||||||||||||:||||||:|
RBAM_024300__ 51 GDLPKEWGSLSSLIGASVFPIGLVLVVLAGAELITGNMMSVSMALFSRRI 100
BSNT_03946___ 101 SVKELAINWGIVTIMNLIGALFVAYFFGHLVGLTETGPYLEKTIAVAQGK 150
|...|..||.|||:|||:|||||||||||:||||||||||||||||||||
RBAM_024300__ 101 SAGALVKNWVIVTLMNLVGALFVAYFFGHVVGLTETGPYLEKTIAVAQGK 150
BSNT_03946___ 151 LDMSFGKVLISAIGCNWLVCLAVWLSFGAQDAAGKILGIWFPTMAFVAIG 200
|||.||||::|||||||||||||||||||:|.||||.|||||.|||||||
RBAM_024300__ 151 LDMPFGKVIVSAIGCNWLVCLAVWLSFGAEDGAGKIAGIWFPIMAFVAIG 200
BSNT_03946___ 201 FQHVVANMFVIPAAIFAGSFTWGQFIGNIIPAFIGNVIGGAVFVGLIYFI 250
|||||||||:||||||||||:||..|||:|||||||||||||||||||||
RBAM_024300__ 201 FQHVVANMFIIPAAIFAGSFSWGDLIGNLIPAFIGNVIGGAVFVGLIYFI 250
BSNT_03946___ 251 AYHKKDRSRKEMKQVS 266
||.|||:.::.||:||
RBAM_024300__ 251 AYSKKDQKKQGMKRVS 266
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