Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03949 and RBAM_024310

See DNA alignment / Visit BSNT_03949 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence pep-align/BSNT_03949___yrhF.1.9828.seq
#    -bsequence pep-align/RBAM_024310___yrhF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03949___yrhF-RBAM_024310___yrhF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03949___yrhF-RBAM_024310___yrhF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03949___yrhF
# 2: RBAM_024310___yrhF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:     112/122 (91.8%)
# Similarity:   119/122 (97.5%)
# Gaps:           0/122 ( 0.0%)
# Score: 569.0
# 
#
#=======================================

BSNT_03949___      1 MSKKIHEFNDIIRKLRKELFGKGPERIHTVFVENMAVSTLYGNLSASEQF     50
                     ||||||||||||||||||||||||||||||||:|||||||||||||||||
RBAM_024310__      1 MSKKIHEFNDIIRKLRKELFGKGPERIHTVFVDNMAVSTLYGNLSASEQF     50

BSNT_03949___     51 IARTPEGREMVHAARTSLIQDLYSKQTPEGMEELMGAKLVHLFSDIKIEE    100
                     ||||||||||||||||||||:|||||||:|||||:|||||||||||||||
RBAM_024310__     51 IARTPEGREMVHAARTSLIQELYSKQTPDGMEELIGAKLVHLFSDIKIEE    100

BSNT_03949___    101 NIAVSVFVFDRKIDEQKEVLQS    122
                     |||||||||||.|:|.||.::|
RBAM_024310__    101 NIAVSVFVFDRSIEEHKEEIKS    122


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