Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03996 and RBAM_024640
See
DNA alignment /
Visit
BSNT_03996 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence pep-align/BSNT_03996___rarA.1.9828.seq
# -bsequence pep-align/RBAM_024640___yrvN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03996___rarA-RBAM_024640___yrvN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03996___rarA-RBAM_024640___yrvN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03996___rarA
# 2: RBAM_024640___yrvN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 422
# Identity: 382/422 (90.5%)
# Similarity: 406/422 (96.2%)
# Gaps: 1/422 ( 0.2%)
# Score: 1973.0
#
#
#=======================================
BSNT_03996___ 1 MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIG 50
||||||||||..|||||||:|||.|||||||||:||||||||||||||||
RBAM_024640__ 1 MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIG 50
BSNT_03996___ 51 KTSIATAIAGSTSIAFRKLNAVINNKKDMEIVAQEAKMSGQVILILDEVH 100
|||||||||||||||||||||||:||||||||.|||||||||||||||||
RBAM_024640__ 51 KTSIATAIAGSTSIAFRKLNAVIHNKKDMEIVVQEAKMSGQVILILDEVH 100
BSNT_03996___ 101 RLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024640__ 101 RLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLT 150
BSNT_03996___ 151 PDLIKQALERALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALE 200
||||||||||||.|||||||:||||:||.||:|||.||||||||||||||
RBAM_024640__ 151 PDLIKQALERALTDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALE 200
BSNT_03996___ 201 LAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHYDVLSAFQKSI 250
|||||||||:||.|.||.|||||||||||::|||:|||||||||||||||
RBAM_024640__ 201 LAVLSTKESSDGTIRITRETAEECLQKKSYTHDKNGDAHYDVLSAFQKSI 250
BSNT_03996___ 251 RGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNA 300
||||||||||||||||||||||||:|||||||||||||||||||||||:|
RBAM_024640__ 251 RGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLSA 300
BSNT_03996___ 301 IQTAERVGFPEARIPLANAVIELCLSPKSNSAILAIDEALADIRAGKIGD 350
||||||:||||||||||||||||||||||||||.|:||||.|||.|||||
RBAM_024640__ 301 IQTAERIGFPEARIPLANAVIELCLSPKSNSAISAVDEALKDIRTGKIGD 350
BSNT_03996___ 351 VPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP 400
||||||||||||||||||||.|:|||::::|||||||||:.|||||||||
RBAM_024640__ 351 VPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPEPLKNKQYYKP 400
BSNT_03996___ 401 KQTGKFESALKQVYDKLMKRK- 421
|||||||:|:||||:||||:|
RBAM_024640__ 401 KQTGKFEAAIKQVYEKLMKQKK 422
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.