Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03997 and RBAM_024650

See DNA alignment / Visit BSNT_03997 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_03997___yrvM.1.9828.seq
#    -bsequence pep-align/RBAM_024650___yrvM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03997___yrvM-RBAM_024650___yrvM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03997___yrvM-RBAM_024650___yrvM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03997___yrvM
# 2: RBAM_024650___yrvM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     237/254 (93.3%)
# Similarity:   251/254 (98.8%)
# Gaps:           0/254 ( 0.0%)
# Score: 1210.0
# 
#
#=======================================

BSNT_03997___      1 MLHQFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRIL     50
                     |||||||||||||||||:|||||||||||||||||||||||||||||||:
RBAM_024650__      1 MLHQFSRNELAIGKEGLDTLKNSTVAVLGVGGVGSFAAEALARSGVGRIV     50

BSNT_03997___     51 LVDKDDVDITNVNRQLHALLSTVGQPKVDLMKARIADINPECEVISLKMF    100
                     |||||||||||||||||||||||||||.||||||||||||:|:|::||||
RBAM_024650__     51 LVDKDDVDITNVNRQLHALLSTVGQPKTDLMKARIADINPDCDVVALKMF    100

BSNT_03997___    101 YTEETYEQFFDYDLDYVIDASDTICYKIHLMKECLKRDIPLISSMGAANK    150
                     ||||||||||:|.|||||||||||.||||||||||||::|||||||||||
RBAM_024650__    101 YTEETYEQFFEYPLDYVIDASDTIHYKIHLMKECLKRNVPLISSMGAANK    150

BSNT_03997___    151 TDPTRFQIADISKTHTDPIAKVVRTKLRKEGIKKGVQVIFSDESPIVIRE    200
                     |||||||||||||||||||||||||:||||||||||||||||||||||||
RBAM_024650__    151 TDPTRFQIADISKTHTDPIAKVVRTRLRKEGIKKGVQVIFSDESPIVIRE    200

BSNT_03997___    201 DVRKEVGNDEAKIRKAKMPPSSNAFVPSVAGLIMGGHVVMDLLKDIEIKR    250
                     ||||||||||||||||:|||||||:|||||||||||||||:|||||:|||
RBAM_024650__    201 DVRKEVGNDEAKIRKAQMPPSSNAWVPSVAGLIMGGHVVMELLKDIDIKR    250

BSNT_03997___    251 VKDK    254
                     ||||
RBAM_024650__    251 VKDK    254


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