Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04023 and RBAM_024850

See DNA alignment / Visit BSNT_04023 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_04023___ruvA.1.9828.seq
#    -bsequence pep-align/RBAM_024850___ruvA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04023___ruvA-RBAM_024850___ruvA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04023___ruvA-RBAM_024850___ruvA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04023___ruvA
# 2: RBAM_024850___ruvA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity:     186/201 (92.5%)
# Similarity:   194/201 (96.5%)
# Gaps:           0/201 ( 0.0%)
# Score: 952.0
# 
#
#=======================================

BSNT_04023___      1 MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHI     50
                     |||||||||||||||||||||||||||:|||||||||..:||||||||||
RBAM_024850__      1 MIEFVKGTIDYVSPQYIVIENGGIGYQVFTPNPFIYKVSNQETIFTYHHI     50

BSNT_04023___     51 REDAFSLYGFSTREEKALFTKLLNVTGIGPKGALAILGSGDPGAVIQAIE    100
                     :|||||||||||||||||||||||||||||||||||||||||||||:|||
RBAM_024850__     51 KEDAFSLYGFSTREEKALFTKLLNVTGIGPKGALAILGSGDPGAVIEAIE    100

BSNT_04023___    101 NEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQ    150
                     .||||||||||||||||||||||||||||||||||||:||||||.|:|||
RBAM_024850__    101 QEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIDNLFNHEARIEKQ    150

BSNT_04023___    151 TAETALEEALEALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLL    200
                     .|||||:||||||||||||||||||||||||||..|:|||||||||||||
RBAM_024850__    151 EAETALDEALEALRVLGYAEKEIKKVLPHLKEETALSTDQYVKKALQKLL    200

BSNT_04023___    201 K    201
                     |
RBAM_024850__    201 K    201


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