Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04061 and RBAM_025020
See
DNA alignment /
Visit
BSNT_04061 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence pep-align/BSNT_04061___spoIVFB.1.9828.seq
# -bsequence pep-align/RBAM_025020___spoIVFB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04061___spoIVFB-RBAM_025020___spoIVFB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04061___spoIVFB-RBAM_025020___spoIVFB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04061___spoIVFB
# 2: RBAM_025020___spoIVFB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity: 221/288 (76.7%)
# Similarity: 253/288 (87.8%)
# Gaps: 0/288 ( 0.0%)
# Score: 1211.0
#
#
#=======================================
BSNT_04061___ 1 MNKWLDLILKIHVHPFLWIIAALGLLTGHMKALFCLLLIVLIHELGHAAL 50
|||||.|:.|||||||||||..|||:|||:|||.||||:|.:||||||||
RBAM_025020__ 1 MNKWLILLFKIHVHPFLWIIMGLGLMTGHIKALLCLLLVVSVHELGHAAL 50
BSNT_04061___ 51 AVFFSWRIKRVFLLPFGGTVEVEEHGNRPLKEEFAVIIAGPLQHIWLQFA 100
||||||||||:||||||||||||||||||||||||||:||||||:|||.|
RBAM_025020__ 51 AVFFSWRIKRIFLLPFGGTVEVEEHGNRPLKEEFAVILAGPLQHVWLQAA 100
BSNT_04061___ 101 AWMLAEVSVIHQHTFELFTFYNLSILFVNLLPIWPLDGGKLLFLLFSKQL 150
||:........:.|||:||||||||||:||||||||||||.:||.||||:
RBAM_025020__ 101 AWLFFMSGFASEQTFEMFTFYNLSILFINLLPIWPLDGGKFVFLYFSKQM 150
BSNT_04061___ 151 PFQKAHRLNLKTSLCFCLLLGCWVLFVIPLQISAWVLFVFLAVSLFEEYR 200
.|||||.|:|:||....|||.||::..:|||:||||||||||.||::|||
RBAM_025020__ 151 AFQKAHLLSLQTSAVSALLLCCWIVLAVPLQVSAWVLFVFLAASLWDEYR 200
BSNT_04061___ 201 QRHYIHVRFLLERYYGKNRELEKLLPLTVKAEDKVYHVMAEFKRGCKHPI 250
:||||.:||||||||||||::..|.||||.|:.||.||||||||||||||
RBAM_025020__ 201 KRHYIQLRFLLERYYGKNRDVAMLHPLTVAADAKVKHVMAEFKRGCKHPI 250
BSNT_04061___ 251 IIEKSGQKLSQLDENEVLHAYFADKRTNSSMEELLLPY 288
|:||:|:||||||||||||||||||||:||||:|||||
RBAM_025020__ 251 IVEKAGEKLSQLDENEVLHAYFADKRTDSSMEDLLLPY 288
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.