Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_04080 and RBAM_025140

See DNA alignment / Visit BSNT_04080 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence pep-align/BSNT_04080___valS.1.9828.seq
#    -bsequence pep-align/RBAM_025140___valS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04080___valS-RBAM_025140___valS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04080___valS-RBAM_025140___valS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04080___valS
# 2: RBAM_025140___valS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 880
# Identity:     824/880 (93.6%)
# Similarity:   854/880 (97.0%)
# Gaps:           0/880 ( 0.0%)
# Score: 4433.0
# 
#
#=======================================

BSNT_04080___      1 METNEQTMPTKYDPAAVEKDRYDFWLKGKFFEAGSDQTKEPYSVVIPPPN     50
                     |:||||||||||||:|:||.|||||||||:||||.||||:||||||||||
RBAM_025140__      1 MDTNEQTMPTKYDPSAIEKGRYDFWLKGKYFEAGGDQTKQPYSVVIPPPN     50

BSNT_04080___     51 VTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025140__     51 VTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAK    100

BSNT_04080___    101 LREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFT    150
                     |||:|.|||||||||||||||||||||||||||||||:||||||||||||
RBAM_025140__    101 LREQGTSRYDLGREKFLEETWKWKEEYADFIRSQWAKMGLGLDYSRERFT    150

BSNT_04080___    151 LDEGLSKAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQ    200
                     |||||:|||||||||||:||||||||||||||||||||||||||||||||
RBAM_025140__    151 LDEGLNKAVREVFVKLYKKGLIYRGEYIINWDPATKTALSDIEVIYKDVQ    200

BSNT_04080___    201 GAFYHMSYPLADGSGSIEIATTRPETMLGDTAVAVHPEDERYKHLIGKTV    250
                     |||||:.|||||||||||||||||||||||||||||||||||||||||||
RBAM_025140__    201 GAFYHLRYPLADGSGSIEIATTRPETMLGDTAVAVHPEDERYKHLIGKTV    250

BSNT_04080___    251 ILPIVNREIPIVGDDYVDMEFGSGAVKITPAHDPNDFELGNRHNLERILV    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_025140__    251 ILPITNREIPIVGDDYVDMEFGSGAVKITPAHDPNDFELGNRHNLERILV    300

BSNT_04080___    301 MNEDGTMNENALQYQGMDRFECRKKLVKDLQEAGVLFKIEDHMHSVGHSE    350
                     |||||||||.||||.|||||||||||||||||:|||||||||||||||||
RBAM_025140__    301 MNEDGTMNEKALQYNGMDRFECRKKLVKDLQESGVLFKIEDHMHSVGHSE    350

BSNT_04080___    351 RSGAVVEPYLSTQWFVRMQPLADAAIELQKKEEKVNFVPDRFEKTYLHWM    400
                     ||||||||||||||||:||||||||::||.|||||:||||||||||||||
RBAM_025140__    351 RSGAVVEPYLSTQWFVKMQPLADAAVDLQSKEEKVHFVPDRFEKTYLHWM    400

BSNT_04080___    401 ENIRDWCISRQLWWGHRIPAWYHKETGELYVGLEAPEDSENWEQDTDVLD    450
                     ||||||||||||||||||||||||||.|:||||||||||||||||:||||
RBAM_025140__    401 ENIRDWCISRQLWWGHRIPAWYHKETKEVYVGLEAPEDSENWEQDSDVLD    450

BSNT_04080___    451 TWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFFWVSRMIFQG    500
                     |||||||||||||||||..||||||||.||||||||||||||||||||||
RBAM_025140__    451 TWFSSALWPFSTMGWPDENAEDFKRYYSTDVLVTGYDIIFFWVSRMIFQG    500

BSNT_04080___    501 IEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY    550
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025140__    501 LEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY    550

BSNT_04080___    551 FLATGSSPGQDLRFSYEKVESTWNFANKIWNASRFALMNMDGMTYDELDL    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025140__    551 FLATGSSPGQDLRFSYEKVESTWNFANKIWNASRFALMNMDGMTYDELDL    600

BSNT_04080___    601 SGEKSVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWY    650
                     ||||||||||||||||||||.||||||||||||||||||||||||.||||
RBAM_025140__    601 SGEKSVADKWILTRLNETIEDVTQLADRYEFGEVGRHLYNFIWDDVCDWY    650

BSNT_04080___    651 IEMAKLPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLP    700
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
RBAM_025140__    651 IEMAKLPLYGEDEAAKKTTRSVLAYVLDQTMRLLHPFMPFLTEEIWQHLP    700

BSNT_04080___    701 HQGESITVSQWPVVVPEHTDTEATADMKLLVELIRSVRNIRSEVNTPMSK    750
                     |:|||||:|.|||.||||||.||.||||||||||||||||||||||||||
RBAM_025140__    701 HEGESITISSWPVPVPEHTDKEAAADMKLLVELIRSVRNIRSEVNTPMSK    750

BSNT_04080___    751 QVELYIKTSTDEIAARLEANRSYVERFTNPSVLKIGTDIEAVDKAMTAVV    800
                     ||||||||||::||.|||.||||||||||||.|||||||.|.||||||||
RBAM_025140__    751 QVELYIKTSTEDIAGRLEKNRSYVERFTNPSTLKIGTDITAADKAMTAVV    800

BSNT_04080___    801 SGAEVILPLEGLINIDEEIARLQKEFDKLTKEVERVQKKLGNEGFMKKAP    850
                     :||||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_025140__    801 TGAEVILPLEGLINIDEEIARLQKEFDKLTKEVERVQKKLGNEGFIKKAP    850

BSNT_04080___    851 AHVIDEEREKEKDYMAKRDAVQKRMAELKG    880
                     .|||:|||.|||||.|||:||::|:|||||
RBAM_025140__    851 EHVIEEERGKEKDYTAKREAVRQRIAELKG    880


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04080 and RBAM_025140

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
