Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04084 and RBAM_025160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence pep-align/BSNT_04084___ysxE.1.9828.seq
# -bsequence pep-align/RBAM_025160___ysxE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04084___ysxE-RBAM_025160___ysxE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04084___ysxE-RBAM_025160___ysxE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04084___ysxE
# 2: RBAM_025160___ysxE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 341
# Identity: 240/341 (70.4%)
# Similarity: 296/341 (86.8%)
# Gaps: 1/341 ( 0.3%)
# Score: 1360.0
#
#
#=======================================
BSNT_04084___ 1 MEDTQSVLQEYGLTAQFIEPVSPLVWKVYTDYGIFALKKLKEGRGKHFTD 50
||..|||||||||.|::||||||.|||||::|||||||:||..|...|||
RBAM_025160__ 1 MEAVQSVLQEYGLAAEYIEPVSPHVWKVYSNYGIFALKQLKPARSSEFTD 50
BSNT_04084___ 51 HMVAIEEKGFRSFVPVYRTNSGEFFSAGIQYGDTYYLMPWLQFDQEEERD 100
.|:.|||||:|||||:.||.:|:|| ||.|..::||||||||:|||||||
RBAM_025160__ 51 LMIEIEEKGYRSFVPICRTYAGDFF-AGRQTENSYYLMPWLQYDQEEERD 99
BSNT_04084___ 101 QKHAYLFRETARLHERTAQELKVRRDEIERYYGQTKKKWEQDKIFYEQFV 150
|||.|||:|.|:||..|.:::::|.::|..:|..||:.||.||:.||||.
RBAM_025160__ 100 QKHVYLFKEVAKLHSATVRDIQIRTEDISGFYEATKRDWENDKLVYEQFA 149
BSNT_04084___ 151 DRAEKEWYLSPFELQAITYFSETISAVNFALERLEDWYESAKEKDVSRVV 200
||||||||||||||||:||.:||:|||||||||||:|:::||:.|.:|.|
RBAM_025160__ 150 DRAEKEWYLSPFELQAVTYLTETVSAVNFALERLEEWFDAAKDHDKTRAV 199
BSNT_04084___ 201 MNHGSLSIHHFLYNDAGTGYFTNFERASVGPPQNDLLGFYTKMFRGFPKA 250
:||||||..||||||||:|:|||||:|::|||||||||||::|||.:|||
RBAM_025160__ 200 INHGSLSSRHFLYNDAGSGFFTNFEKAALGPPQNDLLGFYSRMFRSYPKA 249
BSNT_04084___ 251 CPECVEWFYGYTKSFPLREAEVSLFLSYMAYPAAMYKVLNGYQTGKRQHE 300
||||::|||.|.|||||||||:||||||||||:||||||..||||:|..|
RBAM_025160__ 250 CPECLDWFYTYHKSFPLREAEISLFLSYMAYPSAMYKVLKRYQTGQRGSE 299
BSNT_04084___ 301 KEECTQLLKAYWQMKNIEPFVMKIHQIEQEKKFQAENESTS 341
||||||||:|:|||||:|||:||:||||:|||.:|||||:|
RBAM_025160__ 300 KEECTQLLRAFWQMKNVEPFLMKVHQIEREKKIKAENESSS 340
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