Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04109 and RBAM_025340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence pep-align/BSNT_04109___leuA.1.9828.seq
# -bsequence pep-align/RBAM_025340___leuA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04109___leuA-RBAM_025340___leuA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04109___leuA-RBAM_025340___leuA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04109___leuA
# 2: RBAM_025340___leuA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 518
# Identity: 435/518 (84.0%)
# Similarity: 468/518 (90.3%)
# Gaps: 21/518 ( 4.1%)
# Score: 2245.0
#
#
#=======================================
BSNT_04109___ 1 ---------------------MNTQEKLAIAKQLERLGADIIEAGFPASS 29
:|::|||||||||||||.|||||||||||
RBAM_025340__ 1 MRKINVFDTTLRDGEQSPGVNLNSREKLAIAKQLERLGVDIIEAGFPASS 50
BSNT_04109___ 30 RGDFLAVQEIARTIKNCSVTGLARCVKGDIDAAWEALKDGAYPRIHVFIA 79
||||||||||||||||||||||||.|||||||||||||||..||||:|||
RBAM_025340__ 51 RGDFLAVQEIARTIKNCSVTGLARSVKGDIDAAWEALKDGVSPRIHIFIA 100
BSNT_04109___ 80 TSDIHLKHKLKMTREQVIERAVEMVTYAKERFPVVQWSAEDACRTELPFL 129
|||||||||||||||:|.|:|||||.|||||||:||||||||||||||||
RBAM_025340__ 101 TSDIHLKHKLKMTREEVKEKAVEMVKYAKERFPIVQWSAEDACRTELPFL 150
BSNT_04109___ 130 AEIVEKVIDAGASVINLPDTVGYLAPAEYGNIFKYMKENVPNIHKAKLSA 179
|||||:||||||||||||||||||.|.|||||||||||:||||.:.||||
RBAM_025340__ 151 AEIVEEVIDAGASVINLPDTVGYLTPDEYGNIFKYMKEHVPNISRVKLSA 200
BSNT_04109___ 180 HCHDDLGMAVANSLAAIENGADQIECAVNGIGERAGNAALEEIAVALHTR 229
||||||||||||||:||||||||||||:||||||||||||||||||||.|
RBAM_025340__ 201 HCHDDLGMAVANSLSAIENGADQIECAINGIGERAGNAALEEIAVALHVR 250
BSNT_04109___ 230 KDFYQVETGITLNEIKRTSDLVSKLTGMAVPRNKAVVGDNAFAHESGIHQ 279
.|.:|.::.:.|:|:||||||||||||||||||||:||||||||||||||
RBAM_025340__ 251 NDAHQADSSLNLHELKRTSDLVSKLTGMAVPRNKAIVGDNAFAHESGIHQ 300
BSNT_04109___ 280 DGFLKEKSTYEIISPELVGVTADALVLGKHSGRHAFKDRLTALGFQFDSE 329
||||||||||||||||||||||||||||||||||||||||..|||||||:
RBAM_025340__ 301 DGFLKEKSTYEIISPELVGVTADALVLGKHSGRHAFKDRLNTLGFQFDSD 350
BSNT_04109___ 330 EINKFFTMFKELTEKKKEITDEDLVSLILEEKVTDRKIGYEFLSLQVHYG 379
||||:||||||||||||||||:||:||||||||||:||||||||||||||
RBAM_025340__ 351 EINKYFTMFKELTEKKKEITDDDLISLILEEKVTDKKIGYEFLSLQVHYG 400
BSNT_04109___ 380 TSQVPTATLSLKNQENAELIQEAATGAGSVEAIYNTLERCIDKDVELLDY 429
||||||||:|||||||.:|:||||||||||||:||||.|||||::||.||
RBAM_025340__ 401 TSQVPTATVSLKNQENEQLMQEAATGAGSVEAVYNTLGRCIDKNIELTDY 450
BSNT_04109___ 430 RIQSNRKGEDAFAQVYVRVLVNGKESAGRGIAQDVLEASAKAYLNAVNRQ 479
|||||||||||.|||:|||.||||||:|||||||||||||||||||||||
RBAM_025340__ 451 RIQSNRKGEDALAQVFVRVTVNGKESSGRGIAQDVLEASAKAYLNAVNRQ 500
BSNT_04109___ 480 LVFQSNMSGLKNHTAVGS 497
||...|:.|||..|||||
RBAM_025340__ 501 LVLDCNLDGLKRQTAVGS 518
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