Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04141 and RBAM_025450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:31
# Commandline: needle
# -asequence pep-align/BSNT_04141___gerM.1.9828.seq
# -bsequence pep-align/RBAM_025450___gerM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04141___gerM-RBAM_025450___gerM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04141___gerM-RBAM_025450___gerM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04141___gerM
# 2: RBAM_025450___gerM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 304/366 (83.1%)
# Similarity: 332/366 (90.7%)
# Gaps: 5/366 ( 1.4%)
# Score: 1567.0
#
#
#=======================================
BSNT_04141___ 1 MLKKGPAVIGATCLTSALLLSGCGLFQSDKAAEEIDPPQDVTFVNDEAGA 50
|||||||||.|||||||.:|||||||||||.|.|||||||:::|.||||.
RBAM_025450__ 1 MLKKGPAVIAATCLTSAFVLSGCGLFQSDKTAGEIDPPQDISYVKDEAGI 50
BSNT_04141___ 51 NSNTTAAKKTESEKSDTAKADQASSTVMRELYLIDKNGYVVAQTLPLPKS 100
. ||..:|||:.|:||||.::|||||||||||||||.|||||||.|
RBAM_025450__ 51 Q-----AKPKQSEKNGTSKADQPANTVMRELYLIDKNGYVAAQTLPLPNS 95
BSNT_04141___ 101 ESTAKQALEYLVQGGPVSEILPNGFRAVLPADTTVNVDIKKDGTAIADFS 150
|.|||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_025450__ 96 EGTAKQALEYLVQGGPVSEILPNGFRAVLPADTTVNVDIKKDGTAVADFS 145
BSNT_04141___ 151 NEFKNYKKEDEQKIVQSVTWTLTQFSSIDKVKLRINGHELKEMPVGGTPI 200
.|||||||||||||:||:||||||||||||||:|||||||||||||||||
RBAM_025450__ 146 KEFKNYKKEDEQKILQSITWTLTQFSSIDKVKIRINGHELKEMPVGGTPI 195
BSNT_04141___ 201 SDDLSRKDGINLETAGVNDLTATHPLTVYYLAENEDSEYYVPVTKRIDNS 250
:.|||||||||:|||||||||.|||||||||||.|.||||||||||||||
RBAM_025450__ 196 TGDLSRKDGINIETAGVNDLTDTHPLTVYYLAETETSEYYVPVTKRIDNS 245
BSNT_04141___ 251 EKDDITAAINELAKGPSKVSGLLTDFSEDVKLVSKPKIKDGRVTLDFNQS 300
|.||||||:.:||.||.|.|||||||:.||||:||||:|||:||||||.|
RBAM_025450__ 246 ETDDITAAVEQLADGPGKASGLLTDFNNDVKLLSKPKVKDGQVTLDFNSS 295
BSNT_04141___ 301 IFGSADEKTKMISSEVLNSIVLTLTEQPDVKSVSVKVNGKSELVNEKGEK 350
|:|||||||||:||.||:||||||||||.:||||:||||||||||||||.
RBAM_025450__ 296 IYGSADEKTKMVSSGVLDSIVLTLTEQPSIKSVSIKVNGKSELVNEKGES 345
BSNT_04141___ 351 LTEPVSRPSQVNTGSF 366
|::|||||||||||||
RBAM_025450__ 346 LSKPVSRPSQVNTGSF 361
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