Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04149 and RBAM_025510

See DNA alignment / Visit BSNT_04149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_04149___sdhA.1.9828.seq
#    -bsequence pep-align/RBAM_025510___sdhA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04149___sdhA-RBAM_025510___sdhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04149___sdhA-RBAM_025510___sdhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04149___sdhA
# 2: RBAM_025510___sdhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 586
# Identity:     566/586 (96.6%)
# Similarity:   579/586 (98.8%)
# Gaps:           0/586 ( 0.0%)
# Score: 3003.0
# 
#
#=======================================

BSNT_04149___      1 MSQSSIIVVGGGLAGLMATIKAAESGMAVKLFSIVPVKRSHSVCAQGGIN     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_025510__      1 MSQSSIIVVGGGLAGLMATIKAAESGTAVKLFSIVPVKRSHSVCAQGGIN     50

BSNT_04149___     51 GAVNTKGEGDSPWEHFDDTVYGGDFLANQPPVKAMCEAAPSIIHLLDRMG    100
                     ||||||||||||:|||||||||||||||||||||||||||||||||||||
RBAM_025510__     51 GAVNTKGEGDSPFEHFDDTVYGGDFLANQPPVKAMCEAAPSIIHLLDRMG    100

BSNT_04149___    101 VMFNRTPEGLLDFRRFGGTQHHRTAYAGATTGQQLLYALDEQVRRYEVAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025510__    101 VMFNRTPEGLLDFRRFGGTQHHRTAYAGATTGQQLLYALDEQVRRYEVAG    150

BSNT_04149___    151 LVTKYEGWEFLGAVLDDDRTCRGIVAQNLTNMQIESFRSDAVIMATGGPG    200
                     |||||||||||||||||:||||||||||||||||||||||||||||||||
RBAM_025510__    151 LVTKYEGWEFLGAVLDDERTCRGIVAQNLTNMQIESFRSDAVIMATGGPG    200

BSNT_04149___    201 IIFGKSTNSMINTGSAASIVYQQGAYYANGEFIQIHPTAIPGDDKLRLMS    250
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025510__    201 IVFGKSTNSMINTGSAASIVYQQGAYYANGEFIQIHPTAIPGDDKLRLMS    250

BSNT_04149___    251 ESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025510__    251 ESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK    300

BSNT_04149___    301 LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFMGDDPRKLPMKIFPA    350
                     ||||||||||||||||||||||:|||||||||||||||||||||||||||
RBAM_025510__    301 LGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFMGDDPRKLPMKIFPA    350

BSNT_04149___    351 VHYSMGGLWVDYDQMTNIPGLFAAGECDYSMHGGNRLGANSLLSAIYGGM    400
                     ||||||||||||||||:|.|||||||||||||||||||||||||||||||
RBAM_025510__    351 VHYSMGGLWVDYDQMTSIRGLFAAGECDYSMHGGNRLGANSLLSAIYGGM    400

BSNT_04149___    401 VAGPNAVKYVNGLESSAEDMSSSLFDAHVKKEEEKWADIMSMDGTENAYV    450
                     ||||||||||:|||:||||:||||||::||||||||||||.|||.|||||
RBAM_025510__    401 VAGPNAVKYVSGLETSAEDLSSSLFDSYVKKEEEKWADIMKMDGDENAYV    450

BSNT_04149___    451 LHKELGEWMTANVTVVRHNDKLLKTDDKIQELMERFKKININDTTKWSNQ    500
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025510__    451 LHRELGEWMTANVTVVRHNDKLLKTDDKIQELMERFKKININDTTKWSNQ    500

BSNT_04149___    501 GAMFTRQFSNMLQLARVITLGAYNRNESRGAHYKPDYPERNDDEWLKTTM    550
                     ||||||||||||||||||||||||||||||||||||:|||||||||||||
RBAM_025510__    501 GAMFTRQFSNMLQLARVITLGAYNRNESRGAHYKPDFPERNDDEWLKTTM    550

BSNT_04149___    551 AKHVSPYEAPEFEYQDVDVSLITPRKRDYSKKKVAK    586
                     |||..|:|||||||||||||||.|||||||||||||
RBAM_025510__    551 AKHAGPFEAPEFEYQDVDVSLIAPRKRDYSKKKVAK    586


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