Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04153 and RBAM_025540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence pep-align/BSNT_04153___lysC.1.9828.seq
# -bsequence pep-align/RBAM_025540___lysC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04153___lysC-RBAM_025540___lysC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04153___lysC-RBAM_025540___lysC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04153___lysC
# 2: RBAM_025540___lysC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity: 352/409 (86.1%)
# Similarity: 382/409 (93.4%)
# Gaps: 1/409 ( 0.2%)
# Score: 1742.0
#
#
#=======================================
BSNT_04153___ 1 MGLIVQKFGGTSVGSVEKIQNAANRAIAEKQKGHQVVVVVSAMGKSTDEL 50
|||||||||||||||.||||||||||||||||||.|||||||||||||.|
RBAM_025540__ 1 MGLIVQKFGGTSVGSAEKIQNAANRAIAEKQKGHDVVVVVSAMGKSTDAL 50
BSNT_04153___ 51 VSLAKAISDQPSKREMDMLLATGEQVTISLLSMALQEKGYDAVSYTGWQA 100
|:||..|:.:||:|||||||:||||||||||:||||||||||||||||||
RBAM_025540__ 51 VNLAAEITSEPSRREMDMLLSTGEQVTISLLAMALQEKGYDAVSYTGWQA 100
BSNT_04153___ 101 GIRTEAIHGNARITDIDTSVLADQLEKGKIVIVAGFQGMTEDCEITTLGR 150
|:||||:||||||||||.:.:..||.:|:|.:||||||:|||..||||||
RBAM_025540__ 101 GVRTEAVHGNARITDIDITAIRSQLAEGRITVVAGFQGVTEDGGITTLGR 150
BSNT_04153___ 151 GGSDTTAVALAVALKADKCDIYTDVPGVFTTDPRYVKSARKLAGISYDEM 200
|||||||||||.||:|||||||||||||||||||||:|||||||||||||
RBAM_025540__ 151 GGSDTTAVALAAALEADKCDIYTDVPGVFTTDPRYVRSARKLAGISYDEM 200
BSNT_04153___ 201 LELANLGAGVLHPRAVEFAKNYQVPLEVRSSTETEAGTLIEEESSMEQNL 250
|||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_025540__ 201 LELANLGAGVLHPRAVEFAKNYQVPLEVRSSTEHEAGTLIEEESSMEQNL 250
BSNT_04153___ 251 IVRGIAFEDQITRVTIYGLTSGLTTLSTIFTTLAKRNINVDIIIQTQAED 300
||||||||||||||::.||.|||||||||||.|||||||||||||||::|
RBAM_025540__ 251 IVRGIAFEDQITRVSVTGLASGLTTLSTIFTALAKRNINVDIIIQTQSDD 300
BSNT_04153___ 301 -KTGISFSVKTEDADQTVAVLEEYKDALEFEKIETESKLAKVSIVGSGMV 349
:..||||||||||.||||||||||:||::||||||.|||||||||||||
RBAM_025540__ 301 GEADISFSVKTEDAAQTVAVLEEYKNALDYEKIETERKLAKVSIVGSGMV 350
BSNT_04153___ 350 SNPGVAAEMFAVLAQKNILIKMVSTSEIKVSTVVSENDMVKAVESLHDAF 399
|||||||:||||||:||:.:|||||||||||.||||||||||||:||:||
RBAM_025540__ 351 SNPGVAADMFAVLAEKNVQVKMVSTSEIKVSAVVSENDMVKAVEALHNAF 400
BSNT_04153___ 400 ELSKHPSAV 408
||||.||||
RBAM_025540__ 401 ELSKQPSAV 409
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