Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04164 and RBAM_025590

See DNA alignment / Visit BSNT_04164 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:33
# Commandline: needle
#    -asequence pep-align/BSNT_04164___etfB.1.9828.seq
#    -bsequence pep-align/RBAM_025590___etfB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04164___etfB-RBAM_025590___etfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04164___etfB-RBAM_025590___etfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04164___etfB
# 2: RBAM_025590___etfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     220/257 (85.6%)
# Similarity:   244/257 (94.9%)
# Gaps:           0/257 ( 0.0%)
# Score: 1146.0
# 
#
#=======================================

BSNT_04164___      1 MNLFVLMKRTFDTEEKIVIETGKIQDDGAEWIINPYDEYAIEEAIQLKEK     50
                     ||||||||||||||||||||.||||:||||:||||||||||||||||||:
RBAM_025590__      1 MNLFVLMKRTFDTEEKIVIEAGKIQEDGAEFIINPYDEYAIEEAIQLKEE     50

BSNT_04164___     51 HGGTITAVTVGGEEAEKELRTALAMGCDQAVLINIEDDLEEPDQYSISQV    100
                     ||||:||||||||:|||||||||||||||||||||||||.:|||||||.:
RBAM_025590__     51 HGGTVTAVTVGGEDAEKELRTALAMGCDQAVLINIEDDLSDPDQYSISTI    100

BSNT_04164___    101 LYHYMKDQEFDLILGGNVAIDGGSGQVAPRLAELLDIPCITTITKLEING    150
                     ||||.||:|:|||||||||||||||||||||||||:|||:||||||.|:|
RBAM_025590__    101 LYHYFKDREYDLILGGNVAIDGGSGQVAPRLAELLNIPCVTTITKLTISG    150

BSNT_04164___    151 TDAEAERDVEGDVEKIKTTLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLE    200
                     .:|.||:|.|||.|.|||:|||::||||||||||||||||||||||||||
RBAM_025590__    151 DEAVAEKDNEGDTEIIKTSLPLVITAQQGLNEPRYPSLPGIMKAKKKPLE    200

BSNT_04164___    201 ELELDDLDLDEEDAEPKLKTIERFLPPKKEAGKLLQGEPAEQAKELVSLL    250
                     ||||||||:||:||.||||||||||||:||||:|::||.|||||||||||
RBAM_025590__    201 ELELDDLDIDEDDAAPKLKTIERFLPPQKEAGRLIEGEAAEQAKELVSLL    250

BSNT_04164___    251 RSEAKVI    257
                     |.||||:
RBAM_025590__    251 RKEAKVV    257


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