Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04173 and RBAM_025670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence pep-align/BSNT_04173___yshB.1.9828.seq
# -bsequence pep-align/RBAM_025670___yshB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04173___yshB-RBAM_025670___yshB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04173___yshB-RBAM_025670___yshB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04173___yshB
# 2: RBAM_025670___yshB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 145/177 (81.9%)
# Similarity: 161/177 (91.0%)
# Gaps: 0/177 ( 0.0%)
# Score: 736.0
#
#
#=======================================
BSNT_04173___ 1 MLDIIILILLLMGTLLGLKRGFILQFIRLTSFILSIAFAALFYKNVAPHL 50
|:|||||:|||||||||||||||||||.|||||||||||||||||:||||
RBAM_025670__ 1 MIDIIILVLLLMGTLLGLKRGFILQFIYLTSFILSIAFAALFYKNLAPHL 50
BSNT_04173___ 51 HWIPAPDFSAGQPALSFFTGNLEAAYYNAIAFIVLFIIAKILLRIIGSFL 100
.:|||||||.||.||||..||:|.||||||||::|||||||||||||:.|
RBAM_025670__ 51 SFIPAPDFSGGQAALSFIKGNVETAYYNAIAFVILFIIAKILLRIIGAAL 100
BSNT_04173___ 101 SIVAGIPVIKQINQLLGAVLGFLEVYLFTFVLLYVASVLPVDALQQMMGQ 150
:|:|.||||||||:|||.||||||||||.|:||||||||||.|||.|:.|
RBAM_025670__ 101 NIIASIPVIKQINKLLGGVLGFLEVYLFAFILLYVASVLPVSALQDMLAQ 150
BSNT_04173___ 151 SSLANVIINHTPYLSGLLQELWTQYGA 177
|:|||:|.:|||||||||||||.||||
RBAM_025670__ 151 STLANIITHHTPYLSGLLQELWAQYGA 177
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