Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04175 and RBAM_025690

See DNA alignment / Visit BSNT_04175 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:34
# Commandline: needle
#    -asequence pep-align/BSNT_04175___rnhC.1.9828.seq
#    -bsequence pep-align/RBAM_025690___rnhC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04175___rnhC-RBAM_025690___rnhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04175___rnhC-RBAM_025690___rnhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04175___rnhC
# 2: RBAM_025690___rnhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity:     263/313 (84.0%)
# Similarity:   287/313 (91.7%)
# Gaps:           1/313 ( 0.3%)
# Score: 1351.0
# 
#
#=======================================

BSNT_04175___      1 MSHSVIKVSLSAIDQMKMTYSGSLTASVPQGAVFQAKPPGCTITAYKSGK     50
                     |||||||||.||::|||.:|:||||.:|||||||||||||||||||:|||
RBAM_025690__      1 MSHSVIKVSASAMEQMKQSYAGSLTPAVPQGAVFQAKPPGCTITAYRSGK     50

BSNT_04175___     51 VLFQGKNAAAESARWGTAE-PEKKKMAKKPADPRYAPPADIAGMSVIGSD     99
                     ||||||||..|:||||||| |:.||..||.|||.|||||.||.|||||||
RBAM_025690__     51 VLFQGKNAGTEAARWGTAEAPKAKKTVKKAADPLYAPPAGIASMSVIGSD    100

BSNT_04175___    100 EVGTGDYFGPMTVVCAYVDKTMLPLMKELGVKDSKDLKDPQIIEIARNLI    149
                     ||||||||||:||.|||.|||.|.||||||||||||||||||||||:.||
RBAM_025690__    101 EVGTGDYFGPITVACAYADKTKLSLMKELGVKDSKDLKDPQIIEIAKLLI    150

BSNT_04175___    150 KTIPYSLLVLKNEKYNSMQEKGMSQGKMKALLHNQAITHLLRKLDGVKPE    199
                     ||||||||||||||||.||||||||||||||||||||::||||::|||||
RBAM_025690__    151 KTIPYSLLVLKNEKYNQMQEKGMSQGKMKALLHNQAISNLLRKMNGVKPE    200

BSNT_04175___    200 AILIDQFAEPGVYFNHLKGRDIVKERTYFSTKAEGIHLAVAAASIIARYS    249
                     |||||||||||:||.||.|||||||:|:||||||.|||:|||||||||||
RBAM_025690__    201 AILIDQFAEPGIYFKHLSGRDIVKEKTFFSTKAESIHLSVAAASIIARYS    250

BSNT_04175___    250 FLMEMDKLSREAGMTLPKGAGPHVDEAAAKLILKKGASALRTFTKLHFAN    299
                     ||:||||||||||||:||||||||||||||||:.||..||||||||||||
RBAM_025690__    251 FLIEMDKLSREAGMTIPKGAGPHVDEAAAKLIINKGEGALRTFTKLHFAN    300

BSNT_04175___    300 TQKAQRLADKKRS    312
                     ||||:||.::|||
RBAM_025690__    301 TQKAKRLVERKRS    313


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