Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04195 and RBAM_025790

See DNA alignment / Visit BSNT_04195 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence pep-align/BSNT_04195___araQ.1.9828.seq
#    -bsequence pep-align/RBAM_025790___araQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04195___araQ-RBAM_025790___araQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04195___araQ-RBAM_025790___araQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04195___araQ
# 2: RBAM_025790___araQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     255/281 (90.7%)
# Similarity:   271/281 (96.4%)
# Gaps:           1/281 ( 0.4%)
# Score: 1331.0
# 
#
#=======================================

BSNT_04195___      1 MLRHSPQFSVYRIALTLFFIMLSLLYLFPIFCLLLGSLKPSSELLRVGLN     50
                      :|::..|||||:|.|||||||||||:||:.|||||||||||||:|:|||
RBAM_025790__      1 -MRNNHMFSVYRVAFTLFFIMLSLLYIFPMICLLLGSLKPSSELMRIGLN     49

BSNT_04195___     51 LDIDPKVMSLDNYTFLFNGGSIYFKWFFNSLVLGLFTTMLTLFFSSMIGY    100
                     |.:||.||||||||:||||||||||||||||:||:.||:|||||||:|||
RBAM_025790__     50 LRLDPDVMSLDNYTYLFNGGSIYFKWFFNSLLLGVLTTVLTLFFSSLIGY     99

BSNT_04195___    101 GLAVYDFKGRNIIFVLVLIIMMVPLEVMMLPLFKLTVGLHLIDSYTGVIL    150
                     ||.||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_025790__    100 GLGVYEFKGRNIIFVLVLIIMMVPLEVMMLPLFKLTVGLHLIDSYTGVIL    149

BSNT_04195___    151 PFIVSPVAVFFFRQYALGLPRDLLDSARMDGCTEFGIFFRIMAPLMKPAF    200
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_025790__    150 PFIVSPVAVFFFRQYALGLPKDLLDSARMDGCTEFGIFFRIMAPLMKPAF    199

BSNT_04195___    201 GAMIILQSLNSWNNFLWPLIVLRSKEMFTLPIGLSSLLSPYGNNYDMLIS    250
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_025790__    200 GAMIILQSLNSWNNFLWPLIVLRSKEMFTLPIGLSGLLSPYGNNYDMLIS    249

BSNT_04195___    251 GSVFAILPVIIIFLFFQKYFISGLTVGGVKG    281
                     |||||||||||||||||||||||||||||||
RBAM_025790__    250 GSVFAILPVIIIFLFFQKYFISGLTVGGVKG    280


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