Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04238 and RBAM_026060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence pep-align/BSNT_04238___gapB.1.9828.seq
# -bsequence pep-align/RBAM_026060___gapB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04238___gapB-RBAM_026060___gapB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04238___gapB-RBAM_026060___gapB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04238___gapB
# 2: RBAM_026060___gapB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 299/340 (87.9%)
# Similarity: 322/340 (94.7%)
# Gaps: 0/340 ( 0.0%)
# Score: 1574.0
#
#
#=======================================
BSNT_04238___ 1 MKVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASYSAETLAHLIKYDTI 50
||||||||||||||||||||||.|||||:.||||||..||||||||||||
RBAM_026060__ 1 MKVKVAINGFGRIGRMVFRKAMEDDQIQITAINASYPPETLAHLIKYDTI 50
BSNT_04238___ 51 HGRYDKEVVAGEDSLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKF 100
||:||:||...:||||||||.::|.|.|||::|||:|..|||||||||||
RBAM_026060__ 51 HGKYDQEVETSDDSLIVNGKHIMLFNRRDPRELPWKECGIDIVVEATGKF 100
BSNT_04238___ 101 NAKDKAMGHIEAGAKKVILTAPGKNEDVTIVMGVNEDQFDAERHVIISNA 150
|:|:|||.||||||||||||||||||||||||||||:||:.:.|||||||
RBAM_026060__ 101 NSKEKAMSHIEAGAKKVILTAPGKNEDVTIVMGVNEEQFNPDEHVIISNA 150
BSNT_04238___ 151 SCTTNCLAPVVKVLDEEFGIESGLMTTVHAYTNDQKNIDNPHKDLRRARA 200
|||||||||||||||:||||||||||||||||||||||||||||||||||
RBAM_026060__ 151 SCTTNCLAPVVKVLDQEFGIESGLMTTVHAYTNDQKNIDNPHKDLRRARA 200
BSNT_04238___ 201 CGESIIPTTTGAAKALSLVLPHLKGKLHGLALRVPVPNVSLVDLVVDLKT 250
||||||||:||||||||||||||||||||||||||||||||||||.|:||
RBAM_026060__ 201 CGESIIPTSTGAAKALSLVLPHLKGKLHGLALRVPVPNVSLVDLVCDMKT 250
BSNT_04238___ 251 DVTAEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTM 300
||:||:||.||:|||||||||:||||||||||:|||||.|||:|||||||
RBAM_026060__ 251 DVSAEQVNAAFQRAAKTSMYGILDYSDEPLVSSDYNTNSHSAIIDGLTTM 300
BSNT_04238___ 301 VMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMKHPSAV 340
||||||||||||||||||||||||||||||||||||||||
RBAM_026060__ 301 VMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMKHPSAV 340
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