Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04282 and RBAM_026350

See DNA alignment / Visit BSNT_04282 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence pep-align/BSNT_04282___ytkK.1.9828.seq
#    -bsequence pep-align/RBAM_026350___fabG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04282___ytkK-RBAM_026350___fabG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04282___ytkK-RBAM_026350___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04282___ytkK
# 2: RBAM_026350___fabG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     224/255 (87.8%)
# Similarity:   239/255 (93.7%)
# Gaps:           0/255 ( 0.0%)
# Score: 1146.0
# 
#
#=======================================

BSNT_04282___      1 MRHALITAGSKGLGRKVTETLLAKGYSVTVNYRQDEEAVSRLKEACPDCL     50
                     |||||||||:|||||||||.||.||:|||||||||||||:.||...|.|.
RBAM_026350__      1 MRHALITAGTKGLGRKVTEMLLEKGFSVTVNYRQDEEAVACLKADYPGCH     50

BSNT_04282___     51 DRLQFVKGDVTKKEDLLRIAKAALNRFGRIDFLINNAGPYIFERKKLADY    100
                     |||||||||||:||||:|||.|||.||||||.||||||||||||||||||
RBAM_026350__     51 DRLQFVKGDVTRKEDLMRIADAALQRFGRIDILINNAGPYIFERKKLADY    100

BSNT_04282___    101 TDDEWYGMLEGNLSAVFHLFKAVIPVMRKQQFGRIITYGFQGAAHAPGWL    150
                     :|||||.|||||||||||||||||||||:|:||||||||||||.||||||
RBAM_026350__    101 SDDEWYDMLEGNLSAVFHLFKAVIPVMRQQRFGRIITYGFQGADHAPGWL    150

BSNT_04282___    151 HRSAFGAAKVGLASLTKTIAIEEAEFGITSNMVCPGDIVGDMKEASIEEA    200
                     |||||||||||||||||||||||||.|||:||||||||||||||||||||
RBAM_026350__    151 HRSAFGAAKVGLASLTKTIAIEEAESGITANMVCPGDIVGDMKEASIEEA    200

BSNT_04282___    201 RMRIGKEKTPIGRSGTGEDIARIIAFLCEENSDLVTGTVIEATGGLNVIN    250
                     |.:||||||||||||||||||||||||||::|||||||||||||||||||
RBAM_026350__    201 RRKIGKEKTPIGRSGTGEDIARIIAFLCEDDSDLVTGTVIEATGGLNVIN    250

BSNT_04282___    251 KNQTT    255
                     ::|:.
RBAM_026350__    251 RHQSL    255


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