Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04304 and RBAM_026480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:45
# Commandline: needle
# -asequence pep-align/BSNT_04304___ytcJ.1.9828.seq
# -bsequence pep-align/RBAM_026480___ytcJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04304___ytcJ-RBAM_026480___ytcJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04304___ytcJ-RBAM_026480___ytcJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04304___ytcJ
# 2: RBAM_026480___ytcJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 532
# Identity: 394/532 (74.1%)
# Similarity: 450/532 (84.6%)
# Gaps: 4/532 ( 0.8%)
# Score: 2117.0
#
#
#=======================================
BSNT_04304___ 1 MKAIWHGGFIYTMLEEGDRTEAVYVEDGVIKGTGSYERLKEKYGSPETEE 50
||||||||.|||||::...|||:|.|:||::.|||:..|:..||||:|||
RBAM_026480__ 1 MKAIWHGGTIYTMLDKNHVTEAIYTEEGVVRQTGSFRELQGTYGSPDTEE 50
BSNT_04304___ 51 ISLNGAVMFPGFVDSHLHLIGHGEKQLQLDLSALTSKDAILQAAKERERQ 100
|.|:||||||||.|||:||||||||||:||||.||||:|||:||||.||:
RBAM_026480__ 51 IDLHGAVMFPGFTDSHMHLIGHGEKQLRLDLSQLTSKEAILRAAKEAERE 100
BSNT_04304___ 101 LPKNDWLIGEGWNENQFETPDYLTKHDLDRLFPDRPVLLKRICRHAIAVN 150
|...:|||||||:||.||.|||:||||||.|||||||||||:||||.|||
RBAM_026480__ 101 LEDGEWLIGEGWDENLFEQPDYVTKHDLDPLFPDRPVLLKRVCRHAAAVN 150
BSNT_04304___ 151 SAALQAAGISRNTPDPDGGVIVKDANGEPSGLLFDKAQDLILKAVPPVSQ 200
||||:||||:..||||:||:||:|..| |:|||.||||:|:.:|:||||.
RBAM_026480__ 151 SAALRAAGITNETPDPNGGIIVRDGTG-PTGLLLDKAQELVTQALPPVSL 199
BSNT_04304___ 201 HYVDEALTAAIKDCWTKGLTGGHSEDLSYYGDVSVPMKAYEKAVAGGKYP 250
|||..||..||.|||:|||||||||||:||||.|||:.|||.....|.||
RBAM_026480__ 200 HYVKRALQTAITDCWSKGLTGGHSEDLAYYGDASVPVAAYESLTGSGLYP 249
BSNT_04304___ 251 FRCHLLVHHEAVDRWEQLDKPSGPYVEFGAMKIFADGALGGRTALLKEPY 300
||.||||||||||.|..|||.:|||:|:|||||||||||||||||||:||
RBAM_026480__ 250 FRAHLLVHHEAVDSWSALDKSTGPYLEYGAMKIFADGALGGRTALLKKPY 299
BSNT_04304___ 301 QDDPSTNGVQVHDDETLGRLIRKAREKGMEVAVHAIGDLAFEKVLNAIEK 350
.||||.:||||||||||..|:.||||||||:||||||||||||||:.||:
RBAM_026480__ 300 HDDPSVSGVQVHDDETLAALVYKAREKGMEIAVHAIGDLAFEKVLDVIER 349
BSNT_04304___ 351 HPPKNGRHDRLIHAQVLDNELIERAARMPIALDLQPHFVASDFPWVIDRL 400
:|.|.|:.||||||||||:.|||||||:||.|||||||||||||||||||
RBAM_026480__ 350 YPAKPGQLDRLIHAQVLDDGLIERAARLPIGLDLQPHFVASDFPWVIDRL 399
BSNT_04304___ 401 GKDRMKTAFAWKTLISKGILCAGGSDAPIEPVDPLLGIQSAVLRKSSHEQ 450
|::|||||||||||:|||:||||||||||||.||||||||||||.|....
RBAM_026480__ 400 GEERMKTAFAWKTLLSKGLLCAGGSDAPIEPADPLLGIQSAVLRTSKQHP 449
BSNT_04304___ 451 NGPSYNESECLPVYEAIKLYTEGSAGIIYKEKSRGKIAEGYDADFTVLSG 500
.||:|.|.|||.|||||:|||||||.||:||.|||:||.|||||||||||
RBAM_026480__ 450 EGPAYYEKECLTVYEAIQLYTEGSAAIIHKEHSRGRIAPGYDADFTVLSG 499
BSNT_04304___ 501 DPFAIDPAQLHLLEIKKTVINGQIVYEKS--- 529
|||..||.:||.||..|||:.|:|||||.
RBAM_026480__ 500 DPFRTDPKKLHELEAVKTVVGGRIVYEKEDRQ 531
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