Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04352 and RBAM_026980

See DNA alignment / Visit BSNT_04352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence pep-align/BSNT_04352___ytzB.1.9828.seq
#    -bsequence pep-align/RBAM_026980___ytzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04352___ytzB-RBAM_026980___ytzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04352___ytzB-RBAM_026980___ytzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04352___ytzB
# 2: RBAM_026980___ytzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 105
# Identity:      88/105 (83.8%)
# Similarity:   101/105 (96.2%)
# Gaps:           0/105 ( 0.0%)
# Score: 483.0
# 
#
#=======================================

BSNT_04352___      1 MKLRHLLLGAGLGICAAVVVKQYVMKPYISSEKALRIVKSAFKQRGPIDG     50
                     |||||.|||||:|:|||:.||:|.|||||||||||||||:||||||||||
RBAM_026980__      1 MKLRHFLLGAGVGLCAAIAVKKYAMKPYISSEKALRIVKAAFKQRGPIDG     50

BSNT_04352___     51 SWIYTQPEPYNINGETVQVYKTGITRSAFGELEQYEVMVDAKTGEIVDVI    100
                     |||||:||||.:||||:||||||:|||||||||||||||:||||:|||||
RBAM_026980__     51 SWIYTEPEPYQVNGETIQVYKTGVTRSAFGELEQYEVMVNAKTGQIVDVI    100

BSNT_04352___    101 DTIAS    105
                     |::||
RBAM_026980__    101 DSVAS    105


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