Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04421 and RBAM_027270

See DNA alignment / Visit BSNT_04421 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:53
# Commandline: needle
#    -asequence pep-align/BSNT_04421___ytvA.1.9828.seq
#    -bsequence pep-align/RBAM_027270___ytvA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04421___ytvA-RBAM_027270___ytvA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04421___ytvA-RBAM_027270___ytvA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04421___ytvA
# 2: RBAM_027270___ytvA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     203/261 (77.8%)
# Similarity:   229/261 (87.7%)
# Gaps:           0/261 ( 0.0%)
# Score: 1041.0
# 
#
#=======================================

BSNT_04421___      1 MASFQSFGIPGQLEVIKKALDHVRVGVVITDPALEDNPIVYVNQGFVQMT     50
                     ||....||...|||:|||||||.|:|||||||:||||||:|.||||:.||
RBAM_027270__      1 MADSNVFGKLEQLELIKKALDHARIGVVITDPSLEDNPIIYTNQGFMDMT     50

BSNT_04421___     51 GYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYKKDGT    100
                     ||.:||||||||||||.|.||..:|..||.:|..||.:||:::|.|||||
RBAM_027270__     51 GYSSEEILGKNCRFLQSKETDRQQVAKIRKSLTQKEKITVRLKNVKKDGT    100

BSNT_04421___    101 MFWNELNIDPMEIEDKTYFVGIQKDITKQKEYEKLLEDSLTEITALSTPI    150
                     .|||||||||:.:|||.||||.|||||:||||||||||||||||.|||||
RBAM_027270__    101 PFWNELNIDPLYVEDKLYFVGFQKDITEQKEYEKLLEDSLTEITTLSTPI    150

BSNT_04421___    151 VPIRNGISALPLVGNLTEERFNSIVCTLTNILSTSKDDYLIIDLSGLAQV    200
                     |||||||||||||||||||||:|||.|||:||:.||||||||||||||:|
RBAM_027270__    151 VPIRNGISALPLVGNLTEERFDSIVTTLTDILTASKDDYLIIDLSGLAEV    200

BSNT_04421___    201 NEQTADQIFKLSHLLKLTGTELIITGIKPELAMKMNKLDANFSSLKTFLN    250
                     ||||||:||||.|||||.|||||||||||.|||:||:|||:||||||:||
RBAM_027270__    201 NEQTADRIFKLHHLLKLIGTELIITGIKPTLAMRMNQLDASFSSLKTYLN    250

BSNT_04421___    251 VKDAVNVLPIM    261
                     |||||||||::
RBAM_027270__    251 VKDAVNVLPVV    261


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