Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04434 and RBAM_027380

See DNA alignment / Visit BSNT_04434 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:54
# Commandline: needle
#    -asequence pep-align/BSNT_04434___ytrC.1.9828.seq
#    -bsequence pep-align/RBAM_027380___ytrC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04434___ytrC-RBAM_027380___ytrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04434___ytrC-RBAM_027380___ytrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04434___ytrC
# 2: RBAM_027380___ytrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:     174/329 (52.9%)
# Similarity:   240/329 (72.9%)
# Gaps:           2/329 ( 0.6%)
# Score: 968.0
# 
#
#=======================================

BSNT_04434___      1 MVDRGLLYREWKQNQVVILLSIVFLVLANPLTIYHSYSLNEACLAHSDPK     50
                     |||||||||||.||:.|:::..:||...||..:.::|.:.:.|| .:...
RBAM_027380__      1 MVDRGLLYREWVQNRTVLVMVGLFLAAVNPFEVLNTYLVYQGCL-DTPEA     49

BSNT_04434___     51 FCTFFVDYHIDSLIQINWVIGIILAVCLIGLERSRGTMDFLLGLPYKRNQ    100
                     :|.|:|:.....::.:||...:||||||.||||::||:|.|..|||.|.|
RBAM_027380__     50 YCNFYVNSLESGMLNLNWAPAVILAVCLFGLERTKGTIDTLFSLPYSRAQ     99

BSNT_04434___    101 IFQTKFWLGAVVIVFSQLVGFFLAWLLILFLKPEQVNFFEHGSIGVMITS    150
                     :|.|||||||.||..:|::|:.||.||||.||||:|.||.|.|:|.:|.|
RBAM_027380__    100 VFHTKFWLGAAVITGAQVIGYGLAELLILLLKPERVYFFHHYSVGEIIVS    149

BSNT_04434___    151 IMFYSLVMAAGTLAGNAFAQLLTAFATSVLPYLIIVLPFSNIEIISGVQI    200
                     ::.::||.:||.|.||.|||||||||.|:.|||||.||.||:|:|.||.:
RBAM_027380__    150 VLAFTLVASAGCLTGNTFAQLLTAFAVSIAPYLIITLPLSNVEVIFGVSM    199

BSNT_04434___    201 WKLFPNIEYYFDFENNLMDFSPIAYVDSSWVAESKYLLLIPAVMSILFYF    250
                     ::|.|::|.|....|.....:||.|:|:.||:.|||:|||||||||:||.
RBAM_027380__    200 YELMPSVEAYLKVNNLFQYLNPIMYIDTDWVSASKYILLIPAVMSIVFYA    249

BSNT_04434___    251 IGYISFIKHHNERNGYFFLWKTLDRPIQILVIVLGILGFGIVGHSAGESI    300
                     |||..:::...||||.||||:.|||||||:||::.:||||:.|:|.|.::
RBAM_027380__    250 IGYFCYVRQPVERNGRFFLWRQLDRPIQIVVIIIAVLGFGLAGYSTGHTM    299

BSNT_04434___    301 AGYIIGMIIGGIVGFLISYFSIFKKVRH-    328
                     .||:.|||:||.:|||:|||.|:||.:| 
RBAM_027380__    300 TGYVAGMIVGGAIGFLVSYFVIYKKTKHV    328


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