Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04457 and RBAM_027630

See DNA alignment / Visit BSNT_04457 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence pep-align/BSNT_04457___ytlD.1.9828.seq
#    -bsequence pep-align/RBAM_027630___ytlD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04457___ytlD-RBAM_027630___ytlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04457___ytlD-RBAM_027630___ytlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04457___ytlD
# 2: RBAM_027630___ytlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     219/270 (81.1%)
# Similarity:   248/270 (91.9%)
# Gaps:           0/270 ( 0.0%)
# Score: 1135.0
# 
#
#=======================================

BSNT_04457___      1 MRNSKETIDLLHEQYQFKQKKEKWKVHSFQLAIFILFFSGWEISSRQGWI     50
                     |:||..||:.||:|::.:.:|||.::.::|.||||:||:|||||||.|||
RBAM_027630__      1 MKNSSGTIEQLHQQFKKRHQKEKLRIRAYQAAIFIVFFAGWEISSRAGWI     50

BSNT_04457___     51 DPLIFSSPSAVWRLLLEKLGDGSLLSHIGVTLFETVLGFLLGTFMGTCLA    100
                     |||||||||||.|||:||:.||||.:||||||.|||||||.||.:|||||
RBAM_027630__     51 DPLIFSSPSAVCRLLVEKIADGSLAAHIGVTLGETVLGFLFGTLLGTCLA    100

BSNT_04457___    101 ALLWWSNRLARILDPYLVILNAMPKVALGPILIVALGPSFISIIAMGAII    150
                     |||||||||||:||||||||||||||||||||||||||:|.||:||||:|
RBAM_027630__    101 ALLWWSNRLARVLDPYLVILNAMPKVALGPILIVALGPNFTSIVAMGAVI    150

BSNT_04457___    151 SVIITTIVVYTAFQEVDENYTKVMKTFGAKKWVIFKEVILPASSPAIIST    200
                     |||||||||:||||||||||.|||||||||:.::||||||||.:|||||.
RBAM_027630__    151 SVIITTIVVFTAFQEVDENYIKVMKTFGAKRSIMFKEVILPACAPAIISA    200

BSNT_04457___    201 LKVNVGLSWVGVIVGEFLVSKVGLGYMIIYGFQVFNFTLVFLSLLIIAIF    250
                     ||||||||||||||||||||:.||||||||||||||||||||||||||||
RBAM_027630__    201 LKVNVGLSWVGVIVGEFLVSEKGLGYMIIYGFQVFNFTLVFLSLLIIAIF    250

BSNT_04457___    251 ATLMYQGVELLEKKWTKGRT    270
                     ||||||||||||:|||||:.
RBAM_027630__    251 ATLMYQGVELLERKWTKGKI    270


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